Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AL499627.2-201ENST00000606283 725 ntBASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 AC009086.3-201ENST00000623486 1008 ntBASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 AC087742.1-201ENST00000575880 1738 ntBASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF1Q5TC12 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.58■□□□□ 0.57
ATPAF1Q5TC12 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
ATPAF1Q5TC12 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ATPAF1Q5TC12 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATPAF1Q5TC12 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.58■□□□□ 0.57
ATPAF1Q5TC12 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATPAF1Q5TC12 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATPAF1Q5TC12 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 AL138724.1-201ENST00000606771 1088 ntBASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 AC010542.4-201ENST00000563151 1910 ntBASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 AL121603.2-201ENST00000557373 2117 ntBASIC18.58■□□□□ 0.56
ATPAF1Q5TC12 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
ATPAF1Q5TC12 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 AC005229.4-201ENST00000610085 2198 ntBASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF1Q5TC12 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 SYT6-210ENST00000641643 1587 ntBASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 AC006455.2-201ENST00000429931 906 ntBASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.55■□□□□ 0.56
ATPAF1Q5TC12 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms