Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL38P63173 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL38P63173 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL38P63173 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL38P63173 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL38P63173 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL38P63173 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RPL38P63173 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.71■□□□□ 0.91
RPL38P63173 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPL38P63173 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.71■□□□□ 0.91
RPL38P63173 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RPL38P63173 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.71■□□□□ 0.91
RPL38P63173 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPL38P63173 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL38P63173 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
RPL38P63173 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL38P63173 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RPL38P63173 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL38P63173 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL38P63173 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RPL38P63173 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RPL38P63173 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.7■□□□□ 0.9
RPL38P63173 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL38P63173 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL38P63173 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL38P63173 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.7■□□□□ 0.9
RPL38P63173 OR2I1P-207ENST00000453522 948 ntBASIC20.7■□□□□ 0.9
RPL38P63173 AL512631.2-201ENST00000604634 923 ntBASIC20.7■□□□□ 0.9
RPL38P63173 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RPL38P63173 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPL38P63173 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL38P63173 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RPL38P63173 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.7■□□□□ 0.9
RPL38P63173 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
RPL38P63173 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RPL38P63173 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL38P63173 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL38P63173 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL38P63173 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.69■□□□□ 0.9
RPL38P63173 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPL38P63173 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL38P63173 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL38P63173 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL38P63173 OR7E47P-201ENST00000546390 1422 ntBASIC20.69■□□□□ 0.9
RPL38P63173 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPL38P63173 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.68■□□□□ 0.9
RPL38P63173 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
RPL38P63173 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.68■□□□□ 0.9
RPL38P63173 AC092171.4-201ENST00000609130 632 ntBASIC20.68■□□□□ 0.9
RPL38P63173 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.68■□□□□ 0.9
RPL38P63173 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.68■□□□□ 0.9
RPL38P63173 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL38P63173 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.67■□□□□ 0.9
RPL38P63173 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RPL38P63173 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 AC068587.7-201ENST00000641602 218 ntBASIC20.67■□□□□ 0.9
RPL38P63173 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RPL38P63173 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL38P63173 AC026471.6-201ENST00000622954 1905 ntBASIC20.66■□□□□ 0.9
RPL38P63173 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RPL38P63173 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RPL38P63173 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPL38P63173 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.66■□□□□ 0.9
RPL38P63173 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RPL38P63173 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.66■□□□□ 0.9
RPL38P63173 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.66■□□□□ 0.9
RPL38P63173 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.66■□□□□ 0.9
RPL38P63173 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPL38P63173 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPL38P63173 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPL38P63173 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
RPL38P63173 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPL38P63173 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPL38P63173 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL38P63173 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPL38P63173 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.65■□□□□ 0.9
RPL38P63173 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.65■□□□□ 0.9
RPL38P63173 AL356441.2-201ENST00000443009 864 ntBASIC20.65■□□□□ 0.9
RPL38P63173 AC010525.1-201ENST00000585559 441 ntBASIC20.65■□□□□ 0.9
RPL38P63173 AC087239.1-201ENST00000622671 572 ntBASIC20.65■□□□□ 0.9
RPL38P63173 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPL38P63173 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPL38P63173 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL38P63173 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms