Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN20P56880 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN20P56880 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN20P56880 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN20P56880 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN20P56880 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN20P56880 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN20P56880 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CLDN20P56880 AL121603.2-201ENST00000557373 2117 ntBASIC19.7■□□□□ 0.74
CLDN20P56880 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLDN20P56880 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN20P56880 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN20P56880 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN20P56880 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.69■□□□□ 0.74
CLDN20P56880 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN20P56880 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN20P56880 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN20P56880 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN20P56880 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN20P56880 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN20P56880 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN20P56880 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN20P56880 AC068587.7-201ENST00000641602 218 ntBASIC19.68■□□□□ 0.74
CLDN20P56880 LINC01960-201ENST00000563759 1884 ntBASIC19.68■□□□□ 0.74
CLDN20P56880 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLDN20P56880 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN20P56880 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN20P56880 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN20P56880 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN20P56880 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN20P56880 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN20P56880 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN20P56880 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN20P56880 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLDN20P56880 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN20P56880 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN20P56880 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN20P56880 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN20P56880 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN20P56880 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN20P56880 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLDN20P56880 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CLDN20P56880 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN20P56880 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLDN20P56880 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLDN20P56880 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN20P56880 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN20P56880 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN20P56880 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN20P56880 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN20P56880 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN20P56880 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN20P56880 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN20P56880 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN20P56880 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN20P56880 MIR572-201ENST00000384983 95 ntBASIC19.65■□□□□ 0.74
CLDN20P56880 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN20P56880 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN20P56880 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CLDN20P56880 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN20P56880 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN20P56880 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN20P56880 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN20P56880 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN20P56880 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN20P56880 AC010141.3-201ENST00000456659 717 ntBASIC19.64■□□□□ 0.73
CLDN20P56880 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN20P56880 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLDN20P56880 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN20P56880 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN20P56880 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN20P56880 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms