Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLDN12P56749 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN12P56749 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLDN12P56749 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN12P56749 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN12P56749 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN12P56749 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN12P56749 TSPY13P-201ENST00000338964 914 ntBASIC18.68■□□□□ 0.58
CLDN12P56749 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN12P56749 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN12P56749 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLDN12P56749 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN12P56749 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN12P56749 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN12P56749 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN12P56749 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLDN12P56749 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN12P56749 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN12P56749 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLDN12P56749 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN12P56749 KRT8P33-201ENST00000508125 1423 ntBASIC18.67■□□□□ 0.58
CLDN12P56749 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN12P56749 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN12P56749 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN12P56749 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN12P56749 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN12P56749 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN12P56749 AC103834.1-201ENST00000520383 144 ntBASIC18.67■□□□□ 0.58
CLDN12P56749 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.67■□□□□ 0.58
CLDN12P56749 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CLDN12P56749 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN12P56749 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN12P56749 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN12P56749 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN12P56749 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLDN12P56749 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLDN12P56749 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN12P56749 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN12P56749 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN12P56749 AC137630.3-201ENST00000607245 391 ntBASIC18.66■□□□□ 0.58
CLDN12P56749 MIR6722-201ENST00000617286 78 ntBASIC18.66■□□□□ 0.58
CLDN12P56749 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN12P56749 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLDN12P56749 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN12P56749 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 AC026471.6-201ENST00000622954 1905 ntBASIC18.65■□□□□ 0.58
CLDN12P56749 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 AC103724.3-201ENST00000564481 992 ntBASIC18.65■□□□□ 0.58
CLDN12P56749 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN12P56749 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN12P56749 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLDN12P56749 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.64■□□□□ 0.58
CLDN12P56749 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN12P56749 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN12P56749 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN12P56749 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLDN12P56749 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN12P56749 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLDN12P56749 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN12P56749 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLDN12P56749 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms