Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GFERP55789 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GFERP55789 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFERP55789 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFERP55789 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
GFERP55789 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFERP55789 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.67■□□□□ 0.9
GFERP55789 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFERP55789 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFERP55789 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFERP55789 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GFERP55789 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.66■□□□□ 0.9
GFERP55789 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFERP55789 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.66■□□□□ 0.9
GFERP55789 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GFERP55789 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFERP55789 BID-214ENST00000617586 542 ntTSL 5 BASIC20.66■□□□□ 0.9
GFERP55789 AC073111.5-205ENST00000641717 521 ntBASIC20.66■□□□□ 0.9
GFERP55789 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFERP55789 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.66■□□□□ 0.9
GFERP55789 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFERP55789 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFERP55789 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFERP55789 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.65■□□□□ 0.9
GFERP55789 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.65■□□□□ 0.9
GFERP55789 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.65■□□□□ 0.9
GFERP55789 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.65■□□□□ 0.9
GFERP55789 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.65■□□□□ 0.9
GFERP55789 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.65■□□□□ 0.9
GFERP55789 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 CDCA4P2-201ENST00000441182 718 ntBASIC20.65■□□□□ 0.9
GFERP55789 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GFERP55789 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.65■□□□□ 0.9
GFERP55789 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
GFERP55789 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
GFERP55789 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GFERP55789 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
GFERP55789 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.64■□□□□ 0.89
GFERP55789 RAP2CP1-201ENST00000605103 478 ntBASIC20.64■□□□□ 0.89
GFERP55789 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.64■□□□□ 0.89
GFERP55789 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GFERP55789 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
GFERP55789 C9orf163-202ENST00000624034 2573 ntBASIC20.64■□□□□ 0.89
GFERP55789 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GFERP55789 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.64■□□□□ 0.89
GFERP55789 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
GFERP55789 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
GFERP55789 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
GFERP55789 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFERP55789 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFERP55789 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.63■□□□□ 0.89
GFERP55789 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.63■□□□□ 0.89
GFERP55789 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFERP55789 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GFERP55789 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFERP55789 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFERP55789 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFERP55789 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
GFERP55789 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.62■□□□□ 0.89
GFERP55789 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFERP55789 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFERP55789 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.62■□□□□ 0.89
GFERP55789 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.62■□□□□ 0.89
GFERP55789 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.62■□□□□ 0.89
GFERP55789 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GFERP55789 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.62■□□□□ 0.89
GFERP55789 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.62■□□□□ 0.89
GFERP55789 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.61■□□□□ 0.89
GFERP55789 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.61■□□□□ 0.89
GFERP55789 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.61■□□□□ 0.89
GFERP55789 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.61■□□□□ 0.89
GFERP55789 AL034346.1-201ENST00000568244 1277 ntBASIC20.61■□□□□ 0.89
GFERP55789 AC011767.1-201ENST00000617410 1153 ntBASIC20.61■□□□□ 0.89
GFERP55789 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
GFERP55789 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFERP55789 AC139530.1-201ENST00000575312 1977 ntBASIC20.61■□□□□ 0.89
GFERP55789 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GFERP55789 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFERP55789 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GFERP55789 AP006587.3-201ENST00000525742 1516 ntBASIC20.6■□□□□ 0.89
GFERP55789 ID1-201ENST00000376105 1233 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms