Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.32■■□□□ 1
CDKN2DP55273 AC026310.3-201ENST00000625186 2373 ntBASIC21.32■■□□□ 1
CDKN2DP55273 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDKN2DP55273 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN2DP55273 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.32■■□□□ 1
CDKN2DP55273 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.31■■□□□ 1
CDKN2DP55273 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKN2DP55273 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKN2DP55273 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKN2DP55273 AP005435.1-201ENST00000529293 1178 ntBASIC21.31■■□□□ 1
CDKN2DP55273 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.31■■□□□ 1
CDKN2DP55273 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDKN2DP55273 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKN2DP55273 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDKN2DP55273 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.31■■□□□ 1
CDKN2DP55273 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDKN2DP55273 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDKN2DP55273 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CDKN2DP55273 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDKN2DP55273 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDKN2DP55273 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.3■■□□□ 1
CDKN2DP55273 AC024257.2-201ENST00000549699 147 ntBASIC21.3■■□□□ 1
CDKN2DP55273 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.3■■□□□ 1
CDKN2DP55273 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.3■■□□□ 1
CDKN2DP55273 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDKN2DP55273 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN2DP55273 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDKN2DP55273 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.29■■□□□ 1
CDKN2DP55273 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.29■■□□□ 1
CDKN2DP55273 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDKN2DP55273 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN2DP55273 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.29■■□□□ 1
CDKN2DP55273 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDKN2DP55273 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDKN2DP55273 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDKN2DP55273 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDKN2DP55273 AL136162.1-201ENST00000607711 1078 ntBASIC21.29■■□□□ 1
CDKN2DP55273 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN2DP55273 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDKN2DP55273 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN2DP55273 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CDKN2DP55273 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDKN2DP55273 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDKN2DP55273 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.28■■□□□ 1
CDKN2DP55273 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.28■■□□□ 1
CDKN2DP55273 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.28■■□□□ 1
CDKN2DP55273 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.28■■□□□ 1
CDKN2DP55273 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.28■■□□□ 1
CDKN2DP55273 AC244015.2-201ENST00000616358 1861 ntBASIC21.28■■□□□ 1
CDKN2DP55273 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDKN2DP55273 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDKN2DP55273 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDKN2DP55273 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CDKN2DP55273 AC008406.3-201ENST00000620001 1374 ntBASIC21.27■■□□□ 1
CDKN2DP55273 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDKN2DP55273 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.27■■□□□ 1
CDKN2DP55273 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.27■■□□□ 1
CDKN2DP55273 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDKN2DP55273 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDKN2DP55273 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CDKN2DP55273 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDKN2DP55273 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CDKN2DP55273 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.27■■□□□ 1
CDKN2DP55273 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDKN2DP55273 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
CDKN2DP55273 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CDKN2DP55273 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CDKN2DP55273 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDKN2DP55273 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CDKN2DP55273 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDKN2DP55273 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.26■□□□□ 0.99
CDKN2DP55273 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.26■□□□□ 0.99
CDKN2DP55273 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.26■□□□□ 0.99
CDKN2DP55273 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 AC135279.3-201ENST00000610945 1311 ntBASIC21.26■□□□□ 0.99
CDKN2DP55273 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN2DP55273 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDKN2DP55273 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDKN2DP55273 BX842568.3-201ENST00000418104 571 ntBASIC21.25■□□□□ 0.99
CDKN2DP55273 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.25■□□□□ 0.99
CDKN2DP55273 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.25■□□□□ 0.99
CDKN2DP55273 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms