Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATXN3P54252 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATXN3P54252 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
ATXN3P54252 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ATXN3P54252 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ATXN3P54252 FP325331.1-202ENST00000623531 1380 ntBASIC21.87■■□□□ 1.09
ATXN3P54252 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3P54252 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3P54252 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3P54252 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ATXN3P54252 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.86■■□□□ 1.09
ATXN3P54252 AC026185.1-201ENST00000445748 174 ntBASIC21.86■■□□□ 1.09
ATXN3P54252 AC073111.5-205ENST00000641717 521 ntBASIC21.86■■□□□ 1.09
ATXN3P54252 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3P54252 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3P54252 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.86■■□□□ 1.09
ATXN3P54252 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3P54252 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3P54252 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3P54252 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3P54252 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3P54252 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ATXN3P54252 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.85■■□□□ 1.09
ATXN3P54252 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ATXN3P54252 AC006970.2-201ENST00000450065 779 ntBASIC21.85■■□□□ 1.09
ATXN3P54252 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3P54252 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.85■■□□□ 1.09
ATXN3P54252 BID-214ENST00000617586 542 ntTSL 5 BASIC21.85■■□□□ 1.09
ATXN3P54252 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.85■■□□□ 1.09
ATXN3P54252 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3P54252 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.85■■□□□ 1.09
ATXN3P54252 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ATXN3P54252 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3P54252 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.85■■□□□ 1.09
ATXN3P54252 ANOS2P-203ENST00000472227 1816 ntBASIC21.85■■□□□ 1.09
ATXN3P54252 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.84■■□□□ 1.09
ATXN3P54252 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.84■■□□□ 1.09
ATXN3P54252 CDCA4P2-201ENST00000441182 718 ntBASIC21.84■■□□□ 1.09
ATXN3P54252 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ATXN3P54252 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.84■■□□□ 1.09
ATXN3P54252 DUX4L4-201ENST00000566884 1269 ntBASIC21.84■■□□□ 1.09
ATXN3P54252 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.84■■□□□ 1.09
ATXN3P54252 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.84■■□□□ 1.09
ATXN3P54252 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.84■■□□□ 1.09
ATXN3P54252 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3P54252 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
ATXN3P54252 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.83■■□□□ 1.09
ATXN3P54252 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3P54252 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
ATXN3P54252 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3P54252 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3P54252 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.83■■□□□ 1.09
ATXN3P54252 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.83■■□□□ 1.09
ATXN3P54252 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3P54252 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.83■■□□□ 1.09
ATXN3P54252 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.83■■□□□ 1.09
ATXN3P54252 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATXN3P54252 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.83■■□□□ 1.08
ATXN3P54252 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATXN3P54252 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.83■■□□□ 1.08
ATXN3P54252 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.82■■□□□ 1.08
ATXN3P54252 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN3P54252 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN3P54252 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.82■■□□□ 1.08
ATXN3P54252 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.82■■□□□ 1.08
ATXN3P54252 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN3P54252 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.82■■□□□ 1.08
ATXN3P54252 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.82■■□□□ 1.08
ATXN3P54252 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN3P54252 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
ATXN3P54252 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3P54252 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.81■■□□□ 1.08
ATXN3P54252 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ATXN3P54252 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3P54252 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3P54252 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ATXN3P54252 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
ATXN3P54252 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.81■■□□□ 1.08
ATXN3P54252 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3P54252 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3P54252 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.81■■□□□ 1.08
ATXN3P54252 AL355802.2-201ENST00000402069 882 ntBASIC21.81■■□□□ 1.08
ATXN3P54252 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms