Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.94■□□□□ 0.94
IDH3AP50213 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IDH3AP50213 KRT8P33-201ENST00000508125 1423 ntBASIC20.94■□□□□ 0.94
IDH3AP50213 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.94■□□□□ 0.94
IDH3AP50213 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IDH3AP50213 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3AP50213 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3AP50213 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3AP50213 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
IDH3AP50213 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3AP50213 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
IDH3AP50213 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3AP50213 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.93■□□□□ 0.94
IDH3AP50213 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3AP50213 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3AP50213 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.93■□□□□ 0.94
IDH3AP50213 C17orf82-201ENST00000623772 1530 ntBASIC20.93■□□□□ 0.94
IDH3AP50213 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3AP50213 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.92■□□□□ 0.94
IDH3AP50213 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.92■□□□□ 0.94
IDH3AP50213 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.92■□□□□ 0.94
IDH3AP50213 YBX1P4-201ENST00000392794 808 ntBASIC20.92■□□□□ 0.94
IDH3AP50213 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
IDH3AP50213 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.92■□□□□ 0.94
IDH3AP50213 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3AP50213 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IDH3AP50213 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.91■□□□□ 0.94
IDH3AP50213 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IDH3AP50213 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.91■□□□□ 0.94
IDH3AP50213 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.91■□□□□ 0.94
IDH3AP50213 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.91■□□□□ 0.94
IDH3AP50213 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IDH3AP50213 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
IDH3AP50213 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IDH3AP50213 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IDH3AP50213 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IDH3AP50213 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
IDH3AP50213 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.9■□□□□ 0.94
IDH3AP50213 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.9■□□□□ 0.94
IDH3AP50213 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
IDH3AP50213 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.9■□□□□ 0.94
IDH3AP50213 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.9■□□□□ 0.94
IDH3AP50213 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
IDH3AP50213 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.9■□□□□ 0.94
IDH3AP50213 AL499627.2-201ENST00000606283 725 ntBASIC20.9■□□□□ 0.94
IDH3AP50213 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.9■□□□□ 0.94
IDH3AP50213 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IDH3AP50213 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.9■□□□□ 0.94
IDH3AP50213 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.9■□□□□ 0.94
IDH3AP50213 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.89■□□□□ 0.94
IDH3AP50213 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
IDH3AP50213 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.89■□□□□ 0.94
IDH3AP50213 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
IDH3AP50213 AC079089.2-201ENST00000531211 1277 ntBASIC20.89■□□□□ 0.93
IDH3AP50213 AL031848.2-201ENST00000607670 837 ntBASIC20.89■□□□□ 0.93
IDH3AP50213 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IDH3AP50213 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IDH3AP50213 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IDH3AP50213 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IDH3AP50213 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
IDH3AP50213 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IDH3AP50213 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.88■□□□□ 0.93
IDH3AP50213 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
IDH3AP50213 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
IDH3AP50213 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.88■□□□□ 0.93
IDH3AP50213 AC104564.3-201ENST00000582367 638 ntBASIC20.88■□□□□ 0.93
IDH3AP50213 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
IDH3AP50213 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.88■□□□□ 0.93
IDH3AP50213 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
IDH3AP50213 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.88■□□□□ 0.93
IDH3AP50213 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms