Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.02■□□□□ 0.64
SRP9P49458 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP9P49458 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SRP9P49458 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP9P49458 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP9P49458 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.02■□□□□ 0.64
SRP9P49458 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRP9P49458 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRP9P49458 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP9P49458 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP9P49458 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.01■□□□□ 0.63
SRP9P49458 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP9P49458 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SRP9P49458 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRP9P49458 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19■□□□□ 0.63
SRP9P49458 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP9P49458 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19■□□□□ 0.63
SRP9P49458 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP9P49458 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP9P49458 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SRP9P49458 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19■□□□□ 0.63
SRP9P49458 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19■□□□□ 0.63
SRP9P49458 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SRP9P49458 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP9P49458 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP9P49458 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP9P49458 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP9P49458 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19■□□□□ 0.63
SRP9P49458 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19■□□□□ 0.63
SRP9P49458 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SRP9P49458 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.99■□□□□ 0.63
SRP9P49458 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRP9P49458 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRP9P49458 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SRP9P49458 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SRP9P49458 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SRP9P49458 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.99■□□□□ 0.63
SRP9P49458 DUX4L19-201ENST00000557448 1267 ntBASIC18.99■□□□□ 0.63
SRP9P49458 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.99■□□□□ 0.63
SRP9P49458 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRP9P49458 LINC01529-204ENST00000636474 1715 ntBASIC18.99■□□□□ 0.63
SRP9P49458 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SRP9P49458 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SRP9P49458 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.99■□□□□ 0.63
SRP9P49458 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRP9P49458 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SRP9P49458 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SRP9P49458 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SRP9P49458 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.98■□□□□ 0.63
SRP9P49458 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 AC087742.1-201ENST00000575880 1738 ntBASIC18.98■□□□□ 0.63
SRP9P49458 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.98■□□□□ 0.63
SRP9P49458 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.98■□□□□ 0.63
SRP9P49458 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRP9P49458 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRP9P49458 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRP9P49458 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SRP9P49458 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRP9P49458 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.97■□□□□ 0.63
SRP9P49458 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SRP9P49458 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.97■□□□□ 0.63
SRP9P49458 AC099791.2-201ENST00000605725 427 ntBASIC18.97■□□□□ 0.63
SRP9P49458 AC009086.3-201ENST00000623486 1008 ntBASIC18.97■□□□□ 0.63
SRP9P49458 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.97■□□□□ 0.63
SRP9P49458 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRP9P49458 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRP9P49458 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SRP9P49458 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRP9P49458 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRP9P49458 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.97■□□□□ 0.63
SRP9P49458 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRP9P49458 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.97■□□□□ 0.63
SRP9P49458 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
SRP9P49458 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRP9P49458 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.96■□□□□ 0.63
SRP9P49458 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.96■□□□□ 0.63
SRP9P49458 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.96■□□□□ 0.63
SRP9P49458 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRP9P49458 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRP9P49458 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SRP9P49458 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRP9P49458 AL353803.4-201ENST00000565882 1934 ntBASIC18.96■□□□□ 0.63
SRP9P49458 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRP9P49458 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SRP9P49458 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRP9P49458 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRP9P49458 AL157384.1-201ENST00000445995 2473 ntBASIC18.95■□□□□ 0.62
SRP9P49458 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.95■□□□□ 0.62
SRP9P49458 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRP9P49458 DUX4L4-201ENST00000566884 1269 ntBASIC18.95■□□□□ 0.62
SRP9P49458 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRP9P49458 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms