Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 SPT4YGR063C 309 nt3.15□□□□□ -1.91
CDC40P40968 YHL026CYHL026C 948 nt3.15□□□□□ -1.91
CDC40P40968 RPS7AYOR096W 573 nt3.15□□□□□ -1.91
CDC40P40968 ECM23YPL021W 564 nt3.15□□□□□ -1.91
CDC40P40968 ICY2YPL250C 411 nt3.15□□□□□ -1.91
CDC40P40968 RPS9BYBR189W 588 nt3.15□□□□□ -1.91
CDC40P40968 YCL001W-AYCL001W-A 462 nt3.15□□□□□ -1.91
CDC40P40968 CET1YPL228W 1650 nt3.14□□□□□ -1.91
CDC40P40968 RPL35BYDL136W 363 nt3.14□□□□□ -1.91
CDC40P40968 PEX10YDR265W 1014 nt3.14□□□□□ -1.91
CDC40P40968 EMC2YJR088C 879 nt3.14□□□□□ -1.91
CDC40P40968 YML047W-AYML047W-A 366 nt3.14□□□□□ -1.91
CDC40P40968 COS1YNL336W 1146 nt3.14□□□□□ -1.91
CDC40P40968 YPR074W-AYPR074W-A 171 nt3.14□□□□□ -1.91
CDC40P40968 YPR142CYPR142C 564 nt3.14□□□□□ -1.91
CDC40P40968 MTR4YJL050W 3222 nt3.14□□□□□ -1.91
CDC40P40968 YLR352WYLR352W 2424 nt3.14□□□□□ -1.91
CDC40P40968 RSC1YGR056W 2787 nt3.14□□□□□ -1.91
CDC40P40968 DIT2YDR402C 1470 nt3.14□□□□□ -1.91
CDC40P40968 ALA1YOR335C 2877 nt3.14□□□□□ -1.91
CDC40P40968 HUL5YGL141W 2733 nt3.13□□□□□ -1.91
CDC40P40968 STE24YJR117W 1362 nt3.13□□□□□ -1.91
CDC40P40968 MSM1YGR171C 1728 nt3.13□□□□□ -1.91
CDC40P40968 YDL186WYDL186W 834 nt3.13□□□□□ -1.91
CDC40P40968 YDR464C-AYDR464C-A 189 nt3.13□□□□□ -1.91
CDC40P40968 TYS1YGR185C 1185 nt3.13□□□□□ -1.91
CDC40P40968 EPT1YHR123W 1176 nt3.13□□□□□ -1.91
CDC40P40968 EBP2YKL172W 1284 nt3.13□□□□□ -1.91
CDC40P40968 AHP1YLR109W 531 nt3.13□□□□□ -1.91
CDC40P40968 YLR290CYLR290C 834 nt3.13□□□□□ -1.91
CDC40P40968 TVP18YMR071C 504 nt3.13□□□□□ -1.91
CDC40P40968 YMR178WYMR178W 825 nt3.13□□□□□ -1.91
CDC40P40968 PCL1YNL289W 840 nt3.13□□□□□ -1.91
CDC40P40968 VAM10YOR068C 345 nt3.13□□□□□ -1.91
CDC40P40968 HHF1YBR009C 312 nt3.13□□□□□ -1.91
CDC40P40968 YOR114WYOR114W 885 nt3.13□□□□□ -1.91
CDC40P40968 YPL035CYPL035C 348 nt3.13□□□□□ -1.91
CDC40P40968 THR4YCR053W 1545 nt3.13□□□□□ -1.91
CDC40P40968 USA1YML029W 2517 nt3.13□□□□□ -1.91
CDC40P40968 RPN4YDL020C 1596 nt3.12□□□□□ -1.91
CDC40P40968 PRP22YER013W 3438 nt3.12□□□□□ -1.91
CDC40P40968 YJR061WYJR061W 2808 nt3.12□□□□□ -1.91
CDC40P40968 RNT1YMR239C 1416 nt3.12□□□□□ -1.91
CDC40P40968 MDN1YLR106C 14733 nt3.12□□□□□ -1.91
CDC40P40968 YGL214WYGL214W 486 nt3.12□□□□□ -1.91
CDC40P40968 YGL258W-AYGL258W-A 234 nt3.12□□□□□ -1.91
CDC40P40968 REC104YHR157W 549 nt3.12□□□□□ -1.91
CDC40P40968 YLR364C-AYLR364C-A 123 nt3.12□□□□□ -1.91
CDC40P40968 YLR416CYLR416C 399 nt3.12□□□□□ -1.91
CDC40P40968 GLO1YML004C 981 nt3.12□□□□□ -1.91
CDC40P40968 RUF20RUF20 443 nt3.12□□□□□ -1.91
CDC40P40968 INN1YNL152W 1230 nt3.12□□□□□ -1.91
CDC40P40968 FDH2YPL275W 711 nt3.12□□□□□ -1.91
CDC40P40968 YAT2YER024W 2772 nt3.12□□□□□ -1.91
CDC40P40968 MON1YGL124C 1935 nt3.12□□□□□ -1.91
CDC40P40968 ECM18YDR125C 1362 nt3.12□□□□□ -1.91
CDC40P40968 HRD1YOL013C 1656 nt3.11□□□□□ -1.91
CDC40P40968 FLO8YER109C 2400 nt3.11□□□□□ -1.91
CDC40P40968 FAD1YDL045C 921 nt3.11□□□□□ -1.91
CDC40P40968 YHP1YDR451C 1062 nt3.11□□□□□ -1.91
CDC40P40968 UBC8YEL012W 657 nt3.11□□□□□ -1.91
CDC40P40968 GPP2YER062C 753 nt3.11□□□□□ -1.91
CDC40P40968 SEC53YFL045C 765 nt3.11□□□□□ -1.91
CDC40P40968 YGL074CYGL074C 327 nt3.11□□□□□ -1.91
CDC40P40968 RPB3YIL021W 957 nt3.11□□□□□ -1.91
CDC40P40968 DCG1YIR030C 735 nt3.11□□□□□ -1.91
CDC40P40968 SOD1YJR104C 465 nt3.11□□□□□ -1.91
CDC40P40968 MTD1YKR080W 963 nt3.11□□□□□ -1.91
CDC40P40968 RPL13BYMR142C 600 nt3.11□□□□□ -1.91
CDC40P40968 NRK1YNL129W 723 nt3.11□□□□□ -1.91
CDC40P40968 YBL096CYBL096C 309 nt3.11□□□□□ -1.91
CDC40P40968 MRPL27YBR282W 441 nt3.11□□□□□ -1.91
CDC40P40968 NDC80YIL144W 2076 nt3.11□□□□□ -1.91
CDC40P40968 PIN4YBL051C 2007 nt3.1□□□□□ -1.91
CDC40P40968 SSM4YIL030C 3960 nt3.1□□□□□ -1.91
CDC40P40968 JEN1YKL217W 1851 nt3.1□□□□□ -1.91
CDC40P40968 HSP30YCR021C 999 nt3.1□□□□□ -1.91
CDC40P40968 HOM2YDR158W 1098 nt3.1□□□□□ -1.91
CDC40P40968 GRX2YDR513W 432 nt3.1□□□□□ -1.91
CDC40P40968 ISC10YER180C 804 nt3.1□□□□□ -1.91
CDC40P40968 RPS23AYGR118W 438 nt3.1□□□□□ -1.91
CDC40P40968 IMP3YHR148W 552 nt3.1□□□□□ -1.91
CDC40P40968 YJR037WYJR037W 384 nt3.1□□□□□ -1.91
CDC40P40968 YLR042CYLR042C 486 nt3.1□□□□□ -1.91
CDC40P40968 YNL035CYNL035C 1170 nt3.1□□□□□ -1.91
CDC40P40968 MVD1YNR043W 1191 nt3.1□□□□□ -1.91
CDC40P40968 YPR078CYPR078C 1119 nt3.1□□□□□ -1.91
CDC40P40968 RPS23BYPR132W 438 nt3.1□□□□□ -1.91
CDC40P40968 PHO88YBR106W 567 nt3.1□□□□□ -1.91
CDC40P40968 GCR1YPL075W 2358 nt3.1□□□□□ -1.91
CDC40P40968 DPH6YLR143W 2058 nt3.1□□□□□ -1.91
CDC40P40968 RIF1YBR275C 5751 nt3.1□□□□□ -1.91
CDC40P40968 TFC1YBR123C 1950 nt3.09□□□□□ -1.91
CDC40P40968 TSC13YDL015C 933 nt3.09□□□□□ -1.91
CDC40P40968 YDL242WYDL242W 354 nt3.09□□□□□ -1.91
CDC40P40968 KRE28YDR532C 1158 nt3.09□□□□□ -1.91
CDC40P40968 DOG1YHR044C 741 nt3.09□□□□□ -1.91
CDC40P40968 AUR1YKL004W 1206 nt3.09□□□□□ -1.91
CDC40P40968 FMP46YKR049C 402 nt3.09□□□□□ -1.91
CDC40P40968 TFA2YKR062W 987 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms