Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.64■□□□□ 0.41
SNCAP37840 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SNCAP37840 AL157384.1-201ENST00000445995 2473 ntBASIC17.64■□□□□ 0.41
SNCAP37840 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.64■□□□□ 0.41
SNCAP37840 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNCAP37840 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SNCAP37840 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.63■□□□□ 0.41
SNCAP37840 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SNCAP37840 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.63■□□□□ 0.41
SNCAP37840 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.63■□□□□ 0.41
SNCAP37840 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
SNCAP37840 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SNCAP37840 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SNCAP37840 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.63■□□□□ 0.41
SNCAP37840 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCAP37840 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNCAP37840 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNCAP37840 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.62■□□□□ 0.41
SNCAP37840 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
SNCAP37840 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SNCAP37840 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNCAP37840 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.62■□□□□ 0.41
SNCAP37840 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNCAP37840 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNCAP37840 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNCAP37840 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.62■□□□□ 0.41
SNCAP37840 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SNCAP37840 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNCAP37840 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SNCAP37840 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.62■□□□□ 0.41
SNCAP37840 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNCAP37840 LINC01529-204ENST00000636474 1715 ntBASIC17.61■□□□□ 0.41
SNCAP37840 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SNCAP37840 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.61■□□□□ 0.41
SNCAP37840 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.61■□□□□ 0.41
SNCAP37840 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.61■□□□□ 0.41
SNCAP37840 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.61■□□□□ 0.41
SNCAP37840 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SNCAP37840 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SNCAP37840 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNCAP37840 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNCAP37840 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNCAP37840 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 BX664725.1-201ENST00000438252 379 ntBASIC17.6■□□□□ 0.41
SNCAP37840 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SNCAP37840 MIR6722-201ENST00000617286 78 ntBASIC17.6■□□□□ 0.41
SNCAP37840 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.6■□□□□ 0.41
SNCAP37840 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.6■□□□□ 0.41
SNCAP37840 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
SNCAP37840 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNCAP37840 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNCAP37840 AIRN-201ENST00000601203 4374 ntBASIC17.59■□□□□ 0.41
SNCAP37840 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.59■□□□□ 0.41
SNCAP37840 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNCAP37840 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.59■□□□□ 0.41
SNCAP37840 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNCAP37840 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNCAP37840 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNCAP37840 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.59■□□□□ 0.41
SNCAP37840 FP325331.1-202ENST00000623531 1380 ntBASIC17.59■□□□□ 0.41
SNCAP37840 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.59■□□□□ 0.41
SNCAP37840 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNCAP37840 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNCAP37840 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNCAP37840 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNCAP37840 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SNCAP37840 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNCAP37840 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.58■□□□□ 0.41
SNCAP37840 AL391422.3-201ENST00000603791 2761 ntBASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms