Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.43■□□□□ 0.38
SAA4P35542 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.43■□□□□ 0.38
SAA4P35542 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.43■□□□□ 0.38
SAA4P35542 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.43■□□□□ 0.38
SAA4P35542 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.43■□□□□ 0.38
SAA4P35542 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.43■□□□□ 0.38
SAA4P35542 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.43■□□□□ 0.38
SAA4P35542 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SAA4P35542 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.43■□□□□ 0.38
SAA4P35542 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.42■□□□□ 0.38
SAA4P35542 ESRRAP2-201ENST00000418437 1549 ntBASIC17.42■□□□□ 0.38
SAA4P35542 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.42■□□□□ 0.38
SAA4P35542 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.42■□□□□ 0.38
SAA4P35542 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SAA4P35542 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.42■□□□□ 0.38
SAA4P35542 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.42■□□□□ 0.38
SAA4P35542 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.42■□□□□ 0.38
SAA4P35542 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.42■□□□□ 0.38
SAA4P35542 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.42■□□□□ 0.38
SAA4P35542 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SAA4P35542 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.42■□□□□ 0.38
SAA4P35542 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.42■□□□□ 0.38
SAA4P35542 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SAA4P35542 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SAA4P35542 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SAA4P35542 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SAA4P35542 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SAA4P35542 AC004854.2-201ENST00000608450 1441 ntBASIC17.41■□□□□ 0.38
SAA4P35542 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.41■□□□□ 0.38
SAA4P35542 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.41■□□□□ 0.38
SAA4P35542 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.41■□□□□ 0.38
SAA4P35542 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.41■□□□□ 0.38
SAA4P35542 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.41■□□□□ 0.38
SAA4P35542 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.41■□□□□ 0.38
SAA4P35542 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SAA4P35542 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SAA4P35542 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SAA4P35542 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SAA4P35542 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SAA4P35542 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.41■□□□□ 0.38
SAA4P35542 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.4■□□□□ 0.38
SAA4P35542 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SAA4P35542 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SAA4P35542 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 AP004607.4-201ENST00000530158 1459 ntBASIC17.4■□□□□ 0.38
SAA4P35542 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.4■□□□□ 0.38
SAA4P35542 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.4■□□□□ 0.38
SAA4P35542 KRT18P61-201ENST00000585825 1298 ntBASIC17.4■□□□□ 0.38
SAA4P35542 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.4■□□□□ 0.38
SAA4P35542 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.4■□□□□ 0.38
SAA4P35542 IKBKGP1-201ENST00000612193 1073 ntBASIC17.4■□□□□ 0.38
SAA4P35542 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.4■□□□□ 0.38
SAA4P35542 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SAA4P35542 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SAA4P35542 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SAA4P35542 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SAA4P35542 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SAA4P35542 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SAA4P35542 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.39■□□□□ 0.37
SAA4P35542 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.39■□□□□ 0.37
SAA4P35542 AL137784.2-201ENST00000607332 1000 ntBASIC17.39■□□□□ 0.37
SAA4P35542 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SAA4P35542 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SAA4P35542 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
SAA4P35542 AC055733.4-201ENST00000638462 1354 ntBASIC17.39■□□□□ 0.37
SAA4P35542 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.39■□□□□ 0.37
SAA4P35542 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SAA4P35542 KRT87P-202ENST00000534226 1464 ntBASIC17.38■□□□□ 0.37
SAA4P35542 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SAA4P35542 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SAA4P35542 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SAA4P35542 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms