Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL024507.2-201ENST00000606070 2574 ntBASIC20.45■□□□□ 0.86
PTPN6P29350 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN6P29350 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PTPN6P29350 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN6P29350 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN6P29350 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN6P29350 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PTPN6P29350 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN6P29350 AC006455.2-201ENST00000429931 906 ntBASIC20.44■□□□□ 0.86
PTPN6P29350 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN6P29350 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PTPN6P29350 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN6P29350 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN6P29350 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PTPN6P29350 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.44■□□□□ 0.86
PTPN6P29350 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.44■□□□□ 0.86
PTPN6P29350 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN6P29350 AC005229.4-201ENST00000610085 2198 ntBASIC20.44■□□□□ 0.86
PTPN6P29350 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 SYT6-210ENST00000641643 1587 ntBASIC20.43■□□□□ 0.86
PTPN6P29350 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 MIR638-201ENST00000385237 100 ntBASIC20.43■□□□□ 0.86
PTPN6P29350 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN6P29350 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN6P29350 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN6P29350 AL136162.1-201ENST00000607711 1078 ntBASIC20.43■□□□□ 0.86
PTPN6P29350 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN6P29350 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN6P29350 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN6P29350 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
PTPN6P29350 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN6P29350 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN6P29350 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.42■□□□□ 0.86
PTPN6P29350 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.42■□□□□ 0.86
PTPN6P29350 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN6P29350 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 AC133637.1-201ENST00000624115 1537 ntBASIC20.42■□□□□ 0.86
PTPN6P29350 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN6P29350 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN6P29350 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.41■□□□□ 0.86
PTPN6P29350 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
PTPN6P29350 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN6P29350 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN6P29350 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTPN6P29350 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.41■□□□□ 0.86
PTPN6P29350 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN6P29350 PBX2P1-201ENST00000493219 1291 ntBASIC20.41■□□□□ 0.86
PTPN6P29350 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PTPN6P29350 AC106739.1-201ENST00000617035 715 ntBASIC20.41■□□□□ 0.86
PTPN6P29350 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN6P29350 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PTPN6P29350 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN6P29350 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN6P29350 AC026471.6-201ENST00000622954 1905 ntBASIC20.41■□□□□ 0.86
PTPN6P29350 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN6P29350 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN6P29350 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN6P29350 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN6P29350 SERBP1P1-201ENST00000396021 1160 ntBASIC20.4■□□□□ 0.86
PTPN6P29350 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN6P29350 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN6P29350 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.4■□□□□ 0.86
PTPN6P29350 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN6P29350 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PTPN6P29350 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN6P29350 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN6P29350 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN6P29350 AC135279.3-201ENST00000610945 1311 ntBASIC20.4■□□□□ 0.86
PTPN6P29350 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PTPN6P29350 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN6P29350 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN6P29350 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN6P29350 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN6P29350 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN6P29350 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PTPN6P29350 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN6P29350 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN6P29350 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
PTPN6P29350 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PTPN6P29350 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.39■□□□□ 0.85
PTPN6P29350 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN6P29350 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN6P29350 AC079089.2-201ENST00000531211 1277 ntBASIC20.39■□□□□ 0.85
PTPN6P29350 AC024257.2-201ENST00000549699 147 ntBASIC20.39■□□□□ 0.85
PTPN6P29350 AC133561.4-201ENST00000566112 224 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms