Protein–RNA interactions for Protein: P27797

CALR, Calreticulin, humanhuman

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALRP27797 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CALRP27797 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.48■□□□□ 0.87
CALRP27797 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CALRP27797 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CALRP27797 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CALRP27797 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.48■□□□□ 0.87
CALRP27797 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CALRP27797 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.47■□□□□ 0.87
CALRP27797 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CALRP27797 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CALRP27797 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.47■□□□□ 0.87
CALRP27797 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CALRP27797 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.47■□□□□ 0.87
CALRP27797 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.47■□□□□ 0.87
CALRP27797 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CALRP27797 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.47■□□□□ 0.87
CALRP27797 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CALRP27797 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.46■□□□□ 0.87
CALRP27797 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.46■□□□□ 0.87
CALRP27797 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.46■□□□□ 0.87
CALRP27797 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 HLA-L-211ENST00000482052 1765 ntBASIC20.46■□□□□ 0.87
CALRP27797 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CALRP27797 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CALRP27797 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CALRP27797 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CALRP27797 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CALRP27797 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CALRP27797 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.45■□□□□ 0.86
CALRP27797 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.45■□□□□ 0.86
CALRP27797 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.45■□□□□ 0.86
CALRP27797 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CALRP27797 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CALRP27797 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CALRP27797 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CALRP27797 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CALRP27797 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CALRP27797 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CALRP27797 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CALRP27797 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.44■□□□□ 0.86
CALRP27797 DUX4L11-201ENST00000611504 1267 ntBASIC20.44■□□□□ 0.86
CALRP27797 DUX4L12-201ENST00000614593 1267 ntBASIC20.44■□□□□ 0.86
CALRP27797 DUX4L14-201ENST00000621227 1267 ntBASIC20.44■□□□□ 0.86
CALRP27797 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CALRP27797 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CALRP27797 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.44■□□□□ 0.86
CALRP27797 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CALRP27797 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALRP27797 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.44■□□□□ 0.86
CALRP27797 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.44■□□□□ 0.86
CALRP27797 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.44■□□□□ 0.86
CALRP27797 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.43■□□□□ 0.86
CALRP27797 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALRP27797 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.43■□□□□ 0.86
CALRP27797 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALRP27797 AL157384.1-201ENST00000445995 2473 ntBASIC20.43■□□□□ 0.86
CALRP27797 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CALRP27797 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.43■□□□□ 0.86
CALRP27797 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CALRP27797 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CALRP27797 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALRP27797 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms