Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP4P12644 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BMP4P12644 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
BMP4P12644 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
BMP4P12644 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.63■□□□□ 0.73
BMP4P12644 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.63■□□□□ 0.73
BMP4P12644 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BMP4P12644 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.63■□□□□ 0.73
BMP4P12644 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.63■□□□□ 0.73
BMP4P12644 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
BMP4P12644 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BMP4P12644 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
BMP4P12644 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP4P12644 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.62■□□□□ 0.73
BMP4P12644 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP4P12644 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP4P12644 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP4P12644 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.62■□□□□ 0.73
BMP4P12644 AC133561.4-201ENST00000566112 224 ntBASIC19.62■□□□□ 0.73
BMP4P12644 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.62■□□□□ 0.73
BMP4P12644 AC092171.4-201ENST00000609130 632 ntBASIC19.62■□□□□ 0.73
BMP4P12644 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP4P12644 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
BMP4P12644 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BMP4P12644 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
BMP4P12644 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
BMP4P12644 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
BMP4P12644 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP4P12644 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.61■□□□□ 0.73
BMP4P12644 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP4P12644 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP4P12644 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP4P12644 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.61■□□□□ 0.73
BMP4P12644 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.61■□□□□ 0.73
BMP4P12644 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BMP4P12644 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
BMP4P12644 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
BMP4P12644 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.6■□□□□ 0.73
BMP4P12644 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
BMP4P12644 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP4P12644 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP4P12644 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP4P12644 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.6■□□□□ 0.73
BMP4P12644 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.6■□□□□ 0.73
BMP4P12644 DUX4L19-201ENST00000557448 1267 ntBASIC19.6■□□□□ 0.73
BMP4P12644 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BMP4P12644 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BMP4P12644 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BMP4P12644 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.6■□□□□ 0.73
BMP4P12644 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BMP4P12644 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.59■□□□□ 0.73
BMP4P12644 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BMP4P12644 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BMP4P12644 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.59■□□□□ 0.73
BMP4P12644 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BMP4P12644 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
BMP4P12644 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BMP4P12644 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BMP4P12644 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.58■□□□□ 0.73
BMP4P12644 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BMP4P12644 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.58■□□□□ 0.72
BMP4P12644 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BMP4P12644 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BMP4P12644 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.58■□□□□ 0.72
BMP4P12644 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
BMP4P12644 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.58■□□□□ 0.72
BMP4P12644 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
BMP4P12644 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
BMP4P12644 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP4P12644 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP4P12644 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
BMP4P12644 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.57■□□□□ 0.72
BMP4P12644 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BMP4P12644 AC110285.6-201ENST00000617652 491 ntBASIC19.57■□□□□ 0.72
BMP4P12644 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.57■□□□□ 0.72
BMP4P12644 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP4P12644 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP4P12644 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BMP4P12644 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms