Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBCP0CG48 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBCP0CG48 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
UBCP0CG48 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.84■□□□□ 0.61
UBCP0CG48 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.84■□□□□ 0.61
UBCP0CG48 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBCP0CG48 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBCP0CG48 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.84■□□□□ 0.61
UBCP0CG48 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.84■□□□□ 0.61
UBCP0CG48 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBCP0CG48 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBCP0CG48 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBCP0CG48 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBCP0CG48 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBCP0CG48 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBCP0CG48 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
UBCP0CG48 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.83■□□□□ 0.6
UBCP0CG48 AC079089.2-201ENST00000531211 1277 ntBASIC18.83■□□□□ 0.6
UBCP0CG48 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBCP0CG48 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
UBCP0CG48 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBCP0CG48 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
UBCP0CG48 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBCP0CG48 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBCP0CG48 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 KRT16P3-201ENST00000439127 1283 ntBASIC18.82■□□□□ 0.6
UBCP0CG48 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.82■□□□□ 0.6
UBCP0CG48 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.82■□□□□ 0.6
UBCP0CG48 pRNA.6-201ENST00000610482 90 ntBASIC18.82■□□□□ 0.6
UBCP0CG48 pRNA.5-201ENST00000612139 90 ntBASIC18.82■□□□□ 0.6
UBCP0CG48 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 pRNA.11-201ENST00000618423 90 ntBASIC18.82■□□□□ 0.6
UBCP0CG48 pRNA.13-201ENST00000619112 90 ntBASIC18.82■□□□□ 0.6
UBCP0CG48 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.82■□□□□ 0.6
UBCP0CG48 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.82■□□□□ 0.6
UBCP0CG48 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.82■□□□□ 0.6
UBCP0CG48 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.82■□□□□ 0.6
UBCP0CG48 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBCP0CG48 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.82■□□□□ 0.6
UBCP0CG48 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBCP0CG48 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.81■□□□□ 0.6
UBCP0CG48 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBCP0CG48 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.81■□□□□ 0.6
UBCP0CG48 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.81■□□□□ 0.6
UBCP0CG48 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBCP0CG48 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.81■□□□□ 0.6
UBCP0CG48 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.81■□□□□ 0.6
UBCP0CG48 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBCP0CG48 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.81■□□□□ 0.6
UBCP0CG48 AC068587.7-201ENST00000641602 218 ntBASIC18.81■□□□□ 0.6
UBCP0CG48 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBCP0CG48 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.81■□□□□ 0.6
UBCP0CG48 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBCP0CG48 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBCP0CG48 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBCP0CG48 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBCP0CG48 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBCP0CG48 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBCP0CG48 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBCP0CG48 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBCP0CG48 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBCP0CG48 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.8■□□□□ 0.6
UBCP0CG48 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBCP0CG48 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.8■□□□□ 0.6
UBCP0CG48 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBCP0CG48 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.79■□□□□ 0.6
UBCP0CG48 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBCP0CG48 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBCP0CG48 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBCP0CG48 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.79■□□□□ 0.6
UBCP0CG48 OR7E47P-201ENST00000546390 1422 ntBASIC18.79■□□□□ 0.6
UBCP0CG48 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBCP0CG48 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.79■□□□□ 0.6
UBCP0CG48 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms