Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 MTDHP2-201ENST00000601468 714 ntBASIC20.72■□□□□ 0.91
LINGO3P0C6S8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINGO3P0C6S8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 AC010997.5-201ENST00000609182 354 ntBASIC20.71■□□□□ 0.91
LINGO3P0C6S8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINGO3P0C6S8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.7■□□□□ 0.91
LINGO3P0C6S8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LINGO3P0C6S8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
LINGO3P0C6S8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LINGO3P0C6S8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LINGO3P0C6S8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.7■□□□□ 0.9
LINGO3P0C6S8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 AC079630.1-202ENST00000618127 1840 ntBASIC20.69■□□□□ 0.9
LINGO3P0C6S8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINGO3P0C6S8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINGO3P0C6S8 AC087289.5-201ENST00000586076 3175 ntBASIC20.68■□□□□ 0.9
LINGO3P0C6S8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 AC010542.4-201ENST00000563151 1910 ntBASIC20.67■□□□□ 0.9
LINGO3P0C6S8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINGO3P0C6S8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms