Protein–RNA interactions for Protein: P09871

C1S, Complement C1s subcomponent, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1SP09871 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C1SP09871 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C1SP09871 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C1SP09871 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1SP09871 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1SP09871 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.59■■□□□ 1.05
C1SP09871 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.59■■□□□ 1.05
C1SP09871 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.59■■□□□ 1.05
C1SP09871 OR7E47P-201ENST00000546390 1422 ntBASIC21.59■■□□□ 1.05
C1SP09871 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.59■■□□□ 1.05
C1SP09871 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1SP09871 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1SP09871 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1SP09871 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C1SP09871 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
C1SP09871 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.58■■□□□ 1.05
C1SP09871 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
C1SP09871 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.58■■□□□ 1.05
C1SP09871 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
C1SP09871 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
C1SP09871 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
C1SP09871 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
C1SP09871 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
C1SP09871 AC233723.2-201ENST00000623798 2106 ntBASIC21.58■■□□□ 1.04
C1SP09871 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
C1SP09871 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
C1SP09871 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.57■■□□□ 1.04
C1SP09871 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.57■■□□□ 1.04
C1SP09871 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.57■■□□□ 1.04
C1SP09871 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.57■■□□□ 1.04
C1SP09871 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.57■■□□□ 1.04
C1SP09871 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.57■■□□□ 1.04
C1SP09871 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
C1SP09871 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1SP09871 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
C1SP09871 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1SP09871 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1SP09871 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1SP09871 BX005040.4-201ENST00000637145 1518 ntBASIC21.56■■□□□ 1.04
C1SP09871 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
C1SP09871 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1SP09871 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1SP09871 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
C1SP09871 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
C1SP09871 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.56■■□□□ 1.04
C1SP09871 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1SP09871 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.56■■□□□ 1.04
C1SP09871 TPRG1LP1-201ENST00000598702 760 ntBASIC21.56■■□□□ 1.04
C1SP09871 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.56■■□□□ 1.04
C1SP09871 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
C1SP09871 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.56■■□□□ 1.04
C1SP09871 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
C1SP09871 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C1SP09871 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.55■■□□□ 1.04
C1SP09871 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.55■■□□□ 1.04
C1SP09871 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
C1SP09871 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.55■■□□□ 1.04
C1SP09871 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
C1SP09871 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C1SP09871 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.54■■□□□ 1.04
C1SP09871 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
C1SP09871 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
C1SP09871 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.54■■□□□ 1.04
C1SP09871 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.54■■□□□ 1.04
C1SP09871 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
C1SP09871 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.54■■□□□ 1.04
C1SP09871 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C1SP09871 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C1SP09871 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C1SP09871 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
C1SP09871 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
C1SP09871 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
C1SP09871 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 HLA-L-209ENST00000420110 1011 ntBASIC21.53■■□□□ 1.04
C1SP09871 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
C1SP09871 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
C1SP09871 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 AC012676.1-201ENST00000574705 1949 ntBASIC21.53■■□□□ 1.04
C1SP09871 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C1SP09871 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
C1SP09871 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C1SP09871 GUSBP5-202ENST00000510805 1989 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms