Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP2P08253 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP2P08253 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP2P08253 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP2P08253 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MMP2P08253 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
MMP2P08253 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP2P08253 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP2P08253 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.8■■□□□ 1.08
MMP2P08253 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MMP2P08253 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP2P08253 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP2P08253 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP2P08253 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP2P08253 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.79■■□□□ 1.08
MMP2P08253 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.79■■□□□ 1.08
MMP2P08253 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.79■■□□□ 1.08
MMP2P08253 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.79■■□□□ 1.08
MMP2P08253 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MMP2P08253 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP2P08253 LINC00565-201ENST00000562710 2331 ntBASIC21.79■■□□□ 1.08
MMP2P08253 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP2P08253 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.79■■□□□ 1.08
MMP2P08253 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.79■■□□□ 1.08
MMP2P08253 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
MMP2P08253 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP2P08253 AC026471.6-201ENST00000622954 1905 ntBASIC21.78■■□□□ 1.08
MMP2P08253 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.78■■□□□ 1.08
MMP2P08253 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MMP2P08253 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP2P08253 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.78■■□□□ 1.08
MMP2P08253 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MMP2P08253 AP004607.7-201ENST00000527152 1677 ntBASIC21.78■■□□□ 1.08
MMP2P08253 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.78■■□□□ 1.08
MMP2P08253 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.78■■□□□ 1.08
MMP2P08253 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP2P08253 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.77■■□□□ 1.08
MMP2P08253 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MMP2P08253 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP2P08253 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP2P08253 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.77■■□□□ 1.08
MMP2P08253 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.77■■□□□ 1.08
MMP2P08253 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.77■■□□□ 1.08
MMP2P08253 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.77■■□□□ 1.08
MMP2P08253 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
MMP2P08253 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
MMP2P08253 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.77■■□□□ 1.07
MMP2P08253 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MMP2P08253 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
MMP2P08253 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP2P08253 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.76■■□□□ 1.07
MMP2P08253 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.76■■□□□ 1.07
MMP2P08253 IRS3P-201ENST00000223076 1006 ntBASIC21.76■■□□□ 1.07
MMP2P08253 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP2P08253 ZNRF2P3-201ENST00000424200 374 ntBASIC21.76■■□□□ 1.07
MMP2P08253 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MMP2P08253 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.76■■□□□ 1.07
MMP2P08253 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MMP2P08253 AC012414.1-201ENST00000556676 535 ntBASIC21.76■■□□□ 1.07
MMP2P08253 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MMP2P08253 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.76■■□□□ 1.07
MMP2P08253 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP2P08253 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP2P08253 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP2P08253 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MMP2P08253 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP2P08253 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MMP2P08253 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.75■■□□□ 1.07
MMP2P08253 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP2P08253 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP2P08253 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP2P08253 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MMP2P08253 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP2P08253 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
MMP2P08253 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.74■■□□□ 1.07
MMP2P08253 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP2P08253 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP2P08253 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP2P08253 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.73■■□□□ 1.07
MMP2P08253 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.73■■□□□ 1.07
MMP2P08253 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.73■■□□□ 1.07
MMP2P08253 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.73■■□□□ 1.07
MMP2P08253 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.73■■□□□ 1.07
MMP2P08253 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.73■■□□□ 1.07
MMP2P08253 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP2P08253 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
MMP2P08253 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
MMP2P08253 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms