Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RB1P06400 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RB1P06400 AC007322.4-201ENST00000509611 723 ntBASIC22.98■■□□□ 1.27
RB1P06400 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.98■■□□□ 1.27
RB1P06400 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.98■■□□□ 1.27
RB1P06400 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RB1P06400 DUSP8P5-201ENST00000422884 1815 ntBASIC22.98■■□□□ 1.27
RB1P06400 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RB1P06400 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RB1P06400 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RB1P06400 AC004812.2-201ENST00000611079 2094 ntBASIC22.97■■□□□ 1.27
RB1P06400 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.97■■□□□ 1.27
RB1P06400 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RB1P06400 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.97■■□□□ 1.27
RB1P06400 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.97■■□□□ 1.27
RB1P06400 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.97■■□□□ 1.27
RB1P06400 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
RB1P06400 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.97■■□□□ 1.27
RB1P06400 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.97■■□□□ 1.27
RB1P06400 OR10C1-204ENST00000622521 1039 ntBASIC22.97■■□□□ 1.27
RB1P06400 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.97■■□□□ 1.27
RB1P06400 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.97■■□□□ 1.27
RB1P06400 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
RB1P06400 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RB1P06400 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.97■■□□□ 1.27
RB1P06400 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.97■■□□□ 1.27
RB1P06400 MKRN4P-201ENST00000444706 1521 ntBASIC22.97■■□□□ 1.27
RB1P06400 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RB1P06400 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RB1P06400 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
RB1P06400 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.96■■□□□ 1.27
RB1P06400 AL512625.2-201ENST00000417533 625 ntBASIC22.96■■□□□ 1.27
RB1P06400 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RB1P06400 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RB1P06400 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.96■■□□□ 1.27
RB1P06400 RNA5SP413-201ENST00000516373 109 ntBASIC22.96■■□□□ 1.27
RB1P06400 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RB1P06400 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.96■■□□□ 1.27
RB1P06400 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.96■■□□□ 1.27
RB1P06400 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.96■■□□□ 1.27
RB1P06400 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
RB1P06400 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.96■■□□□ 1.27
RB1P06400 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RB1P06400 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
RB1P06400 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.95■■□□□ 1.26
RB1P06400 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.95■■□□□ 1.26
RB1P06400 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RB1P06400 LINC01124-201ENST00000409786 2117 ntBASIC22.94■■□□□ 1.26
RB1P06400 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RB1P06400 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RB1P06400 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.94■■□□□ 1.26
RB1P06400 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.94■■□□□ 1.26
RB1P06400 CYP2T1P-201ENST00000432607 1285 ntBASIC22.94■■□□□ 1.26
RB1P06400 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.94■■□□□ 1.26
RB1P06400 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.94■■□□□ 1.26
RB1P06400 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RB1P06400 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.94■■□□□ 1.26
RB1P06400 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
RB1P06400 AC092118.2-201ENST00000613495 667 ntBASIC22.94■■□□□ 1.26
RB1P06400 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.94■■□□□ 1.26
RB1P06400 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RB1P06400 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RB1P06400 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RB1P06400 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RB1P06400 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RB1P06400 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RB1P06400 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RB1P06400 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RB1P06400 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
RB1P06400 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.93■■□□□ 1.26
RB1P06400 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RB1P06400 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RB1P06400 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RB1P06400 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.93■■□□□ 1.26
RB1P06400 AC008694.1-202ENST00000636953 945 ntBASIC22.93■■□□□ 1.26
RB1P06400 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RB1P06400 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.93■■□□□ 1.26
RB1P06400 AP004607.7-201ENST00000527152 1677 ntBASIC22.93■■□□□ 1.26
RB1P06400 AC020928.2-201ENST00000588717 2197 ntBASIC22.93■■□□□ 1.26
RB1P06400 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RB1P06400 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RB1P06400 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
RB1P06400 EEF1DP3-203ENST00000566025 782 ntBASIC22.92■■□□□ 1.26
RB1P06400 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RB1P06400 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
RB1P06400 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
RB1P06400 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
RB1P06400 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RB1P06400 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RB1P06400 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.91■■□□□ 1.26
RB1P06400 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RB1P06400 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RB1P06400 PRORSD1P-201ENST00000295112 541 ntBASIC22.91■■□□□ 1.26
RB1P06400 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RB1P06400 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.91■■□□□ 1.26
RB1P06400 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
RB1P06400 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.91■■□□□ 1.26
RB1P06400 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.91■■□□□ 1.26
RB1P06400 AL034346.1-201ENST00000568244 1277 ntBASIC22.91■■□□□ 1.26
RB1P06400 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms