Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
OPN1SWP03999 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
OPN1SWP03999 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
OPN1SWP03999 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.1■□□□□ 0.81
OPN1SWP03999 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.1■□□□□ 0.81
OPN1SWP03999 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.1■□□□□ 0.81
OPN1SWP03999 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.1■□□□□ 0.81
OPN1SWP03999 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.1■□□□□ 0.81
OPN1SWP03999 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
OPN1SWP03999 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
OPN1SWP03999 AC026471.6-201ENST00000622954 1905 ntBASIC20.1■□□□□ 0.81
OPN1SWP03999 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.1■□□□□ 0.81
OPN1SWP03999 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
OPN1SWP03999 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
OPN1SWP03999 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
OPN1SWP03999 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
OPN1SWP03999 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
OPN1SWP03999 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
OPN1SWP03999 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
OPN1SWP03999 AC241377.3-202ENST00000626088 1088 ntBASIC20.09■□□□□ 0.81
OPN1SWP03999 AC241585.3-202ENST00000628937 1088 ntBASIC20.09■□□□□ 0.81
OPN1SWP03999 AC245100.8-202ENST00000629247 1058 ntBASIC20.09■□□□□ 0.81
OPN1SWP03999 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.08■□□□□ 0.81
OPN1SWP03999 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
OPN1SWP03999 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
OPN1SWP03999 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
OPN1SWP03999 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
OPN1SWP03999 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
OPN1SWP03999 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.08■□□□□ 0.81
OPN1SWP03999 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.08■□□□□ 0.81
OPN1SWP03999 AL031602.1-201ENST00000633169 911 ntBASIC20.08■□□□□ 0.81
OPN1SWP03999 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.08■□□□□ 0.81
OPN1SWP03999 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
OPN1SWP03999 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
OPN1SWP03999 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
OPN1SWP03999 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
OPN1SWP03999 Z98882.1-201ENST00000622160 2253 ntBASIC20.07■□□□□ 0.8
OPN1SWP03999 AF106564.1-201ENST00000607058 2553 ntBASIC20.07■□□□□ 0.8
OPN1SWP03999 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.07■□□□□ 0.8
OPN1SWP03999 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
OPN1SWP03999 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
OPN1SWP03999 AC099791.2-201ENST00000605725 427 ntBASIC20.07■□□□□ 0.8
OPN1SWP03999 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.07■□□□□ 0.8
OPN1SWP03999 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPN1SWP03999 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
OPN1SWP03999 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
OPN1SWP03999 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.06■□□□□ 0.8
OPN1SWP03999 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.06■□□□□ 0.8
OPN1SWP03999 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPN1SWP03999 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.06■□□□□ 0.8
OPN1SWP03999 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.05■□□□□ 0.8
OPN1SWP03999 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.05■□□□□ 0.8
OPN1SWP03999 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OPN1SWP03999 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OPN1SWP03999 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OPN1SWP03999 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OPN1SWP03999 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
OPN1SWP03999 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.05■□□□□ 0.8
OPN1SWP03999 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OPN1SWP03999 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.05■□□□□ 0.8
OPN1SWP03999 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OPN1SWP03999 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OPN1SWP03999 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OPN1SWP03999 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OPN1SWP03999 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.04■□□□□ 0.8
OPN1SWP03999 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OPN1SWP03999 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OPN1SWP03999 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
OPN1SWP03999 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.04■□□□□ 0.8
OPN1SWP03999 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
OPN1SWP03999 AC079089.2-201ENST00000531211 1277 ntBASIC20.04■□□□□ 0.8
OPN1SWP03999 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OPN1SWP03999 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OPN1SWP03999 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.03■□□□□ 0.8
OPN1SWP03999 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OPN1SWP03999 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
OPN1SWP03999 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OPN1SWP03999 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
OPN1SWP03999 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
OPN1SWP03999 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.03■□□□□ 0.8
OPN1SWP03999 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms