Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.05■□□□□ 0.8
HCN1O60741 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.05■□□□□ 0.8
HCN1O60741 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.05■□□□□ 0.8
HCN1O60741 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HCN1O60741 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCN1O60741 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCN1O60741 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.04■□□□□ 0.8
HCN1O60741 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
HCN1O60741 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HCN1O60741 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCN1O60741 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCN1O60741 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCN1O60741 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCN1O60741 AC097381.1-201ENST00000429019 1296 ntBASIC20.04■□□□□ 0.8
HCN1O60741 IGHV3-19-201ENST00000521488 291 ntBASIC20.04■□□□□ 0.8
HCN1O60741 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.04■□□□□ 0.8
HCN1O60741 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.04■□□□□ 0.8
HCN1O60741 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.04■□□□□ 0.8
HCN1O60741 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HCN1O60741 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HCN1O60741 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCN1O60741 TSPY26P-201ENST00000476365 1326 ntBASIC20.03■□□□□ 0.8
HCN1O60741 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.03■□□□□ 0.8
HCN1O60741 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCN1O60741 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HCN1O60741 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
HCN1O60741 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCN1O60741 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HCN1O60741 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.03■□□□□ 0.8
HCN1O60741 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCN1O60741 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HCN1O60741 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.03■□□□□ 0.8
HCN1O60741 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HCN1O60741 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HCN1O60741 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCN1O60741 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCN1O60741 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCN1O60741 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.02■□□□□ 0.8
HCN1O60741 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCN1O60741 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HCN1O60741 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.02■□□□□ 0.8
HCN1O60741 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCN1O60741 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HCN1O60741 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCN1O60741 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCN1O60741 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCN1O60741 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.02■□□□□ 0.8
HCN1O60741 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HCN1O60741 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HCN1O60741 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
HCN1O60741 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCN1O60741 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.01■□□□□ 0.79
HCN1O60741 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HCN1O60741 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.01■□□□□ 0.79
HCN1O60741 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.01■□□□□ 0.79
HCN1O60741 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.01■□□□□ 0.79
HCN1O60741 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCN1O60741 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCN1O60741 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
HCN1O60741 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HCN1O60741 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HCN1O60741 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCN1O60741 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCN1O60741 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HCN1O60741 AC092053.2-201ENST00000640557 1818 ntBASIC20■□□□□ 0.79
HCN1O60741 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20■□□□□ 0.79
HCN1O60741 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20■□□□□ 0.79
HCN1O60741 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20■□□□□ 0.79
HCN1O60741 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20■□□□□ 0.79
HCN1O60741 AP005435.1-201ENST00000529293 1178 ntBASIC20■□□□□ 0.79
HCN1O60741 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20■□□□□ 0.79
HCN1O60741 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HCN1O60741 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20■□□□□ 0.79
HCN1O60741 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20■□□□□ 0.79
HCN1O60741 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCN1O60741 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCN1O60741 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HCN1O60741 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 AC087742.1-201ENST00000575880 1738 ntBASIC19.99■□□□□ 0.79
HCN1O60741 AC139530.1-201ENST00000575312 1977 ntBASIC19.99■□□□□ 0.79
HCN1O60741 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.99■□□□□ 0.79
HCN1O60741 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCN1O60741 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.99■□□□□ 0.79
HCN1O60741 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms