Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
GFRA3O60609 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GFRA3O60609 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
GFRA3O60609 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.3■■□□□ 1
GFRA3O60609 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GFRA3O60609 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
GFRA3O60609 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.3■■□□□ 1
GFRA3O60609 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GFRA3O60609 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.3■■□□□ 1
GFRA3O60609 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.3■■□□□ 1
GFRA3O60609 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.3■■□□□ 1
GFRA3O60609 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.3■■□□□ 1
GFRA3O60609 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.3■■□□□ 1
GFRA3O60609 AC008403.3-201ENST00000598924 454 ntBASIC21.3■■□□□ 1
GFRA3O60609 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.3■■□□□ 1
GFRA3O60609 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GFRA3O60609 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.29■■□□□ 1
GFRA3O60609 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
GFRA3O60609 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
GFRA3O60609 OXCT2P1-201ENST00000447263 1535 ntBASIC21.29■■□□□ 1
GFRA3O60609 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.29■■□□□ 1
GFRA3O60609 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GFRA3O60609 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.29■■□□□ 1
GFRA3O60609 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.29■■□□□ 1
GFRA3O60609 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.29■■□□□ 1
GFRA3O60609 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.29■■□□□ 1
GFRA3O60609 AC097493.4-201ENST00000641197 219 ntBASIC21.29■■□□□ 1
GFRA3O60609 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
GFRA3O60609 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.28■■□□□ 1
GFRA3O60609 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.28■■□□□ 1
GFRA3O60609 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GFRA3O60609 AC138907.5-202ENST00000569484 235 ntBASIC21.28■■□□□ 1
GFRA3O60609 AL590326.2-201ENST00000625139 305 ntBASIC21.28■■□□□ 1
GFRA3O60609 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
GFRA3O60609 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.27■■□□□ 1
GFRA3O60609 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.27■■□□□ 1
GFRA3O60609 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.27■■□□□ 1
GFRA3O60609 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.27■■□□□ 1
GFRA3O60609 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.27■■□□□ 1
GFRA3O60609 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
GFRA3O60609 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.27■■□□□ 1
GFRA3O60609 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.27■■□□□ 1
GFRA3O60609 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.27■■□□□ 1
GFRA3O60609 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.27■■□□□ 1
GFRA3O60609 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
GFRA3O60609 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.26■□□□□ 0.99
GFRA3O60609 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GFRA3O60609 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.26■□□□□ 0.99
GFRA3O60609 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GFRA3O60609 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.26■□□□□ 0.99
GFRA3O60609 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.26■□□□□ 0.99
GFRA3O60609 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
GFRA3O60609 TSPY7P-201ENST00000431358 1114 ntBASIC21.26■□□□□ 0.99
GFRA3O60609 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.26■□□□□ 0.99
GFRA3O60609 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
GFRA3O60609 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.26■□□□□ 0.99
GFRA3O60609 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.26■□□□□ 0.99
GFRA3O60609 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.26■□□□□ 0.99
GFRA3O60609 CD177P1-201ENST00000606252 935 ntBASIC21.26■□□□□ 0.99
GFRA3O60609 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
GFRA3O60609 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GFRA3O60609 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GFRA3O60609 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GFRA3O60609 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GFRA3O60609 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
GFRA3O60609 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
GFRA3O60609 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.25■□□□□ 0.99
GFRA3O60609 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.25■□□□□ 0.99
GFRA3O60609 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.25■□□□□ 0.99
GFRA3O60609 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.25■□□□□ 0.99
GFRA3O60609 C2orf69P4-201ENST00000565394 541 ntBASIC21.25■□□□□ 0.99
GFRA3O60609 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.25■□□□□ 0.99
GFRA3O60609 RN7SL850P-201ENST00000579959 291 ntBASIC21.25■□□□□ 0.99
GFRA3O60609 RN7SL471P-201ENST00000580476 299 ntBASIC21.25■□□□□ 0.99
GFRA3O60609 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GFRA3O60609 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GFRA3O60609 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GFRA3O60609 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.24■□□□□ 0.99
GFRA3O60609 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GFRA3O60609 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GFRA3O60609 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GFRA3O60609 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
GFRA3O60609 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.24■□□□□ 0.99
GFRA3O60609 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.24■□□□□ 0.99
GFRA3O60609 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
GFRA3O60609 AC012306.2-201ENST00000609350 630 ntBASIC21.24■□□□□ 0.99
GFRA3O60609 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GFRA3O60609 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GFRA3O60609 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GFRA3O60609 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.24■□□□□ 0.99
GFRA3O60609 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GFRA3O60609 AC010980.2-201ENST00000587099 1412 ntBASIC21.23■□□□□ 0.99
GFRA3O60609 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.23■□□□□ 0.99
GFRA3O60609 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.23■□□□□ 0.99
GFRA3O60609 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
GFRA3O60609 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
GFRA3O60609 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GFRA3O60609 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
GFRA3O60609 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.23■□□□□ 0.99
GFRA3O60609 KRT17P3-201ENST00000420566 1262 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms