Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC28A2O43868 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC28A2O43868 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC28A2O43868 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC28A2O43868 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC28A2O43868 MIR572-201ENST00000384983 95 ntBASIC20.67■□□□□ 0.9
SLC28A2O43868 CDCA4P2-201ENST00000441182 718 ntBASIC20.67■□□□□ 0.9
SLC28A2O43868 AC006970.2-201ENST00000450065 779 ntBASIC20.67■□□□□ 0.9
SLC28A2O43868 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.67■□□□□ 0.9
SLC28A2O43868 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC28A2O43868 RAP2CP1-201ENST00000605103 478 ntBASIC20.67■□□□□ 0.9
SLC28A2O43868 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC28A2O43868 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC28A2O43868 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC28A2O43868 C17orf82-201ENST00000623772 1530 ntBASIC20.67■□□□□ 0.9
SLC28A2O43868 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC28A2O43868 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC28A2O43868 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC28A2O43868 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC28A2O43868 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC28A2O43868 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC28A2O43868 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC28A2O43868 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC28A2O43868 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC28A2O43868 AC026185.1-201ENST00000445748 174 ntBASIC20.66■□□□□ 0.9
SLC28A2O43868 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC28A2O43868 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC28A2O43868 TERF1P2-201ENST00000583350 1212 ntBASIC20.66■□□□□ 0.9
SLC28A2O43868 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SLC28A2O43868 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
SLC28A2O43868 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC28A2O43868 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLC28A2O43868 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC28A2O43868 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC28A2O43868 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC28A2O43868 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SLC28A2O43868 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC28A2O43868 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SLC28A2O43868 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
SLC28A2O43868 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC28A2O43868 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC28A2O43868 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC28A2O43868 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC28A2O43868 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC28A2O43868 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC28A2O43868 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC28A2O43868 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC28A2O43868 FP325331.1-202ENST00000623531 1380 ntBASIC20.64■□□□□ 0.89
SLC28A2O43868 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC28A2O43868 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SLC28A2O43868 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC28A2O43868 TSPY20P-201ENST00000450910 630 ntBASIC20.64■□□□□ 0.89
SLC28A2O43868 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC28A2O43868 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC28A2O43868 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC28A2O43868 AC242852.2-201ENST00000615738 1807 ntBASIC20.64■□□□□ 0.89
SLC28A2O43868 AC127496.7-201ENST00000625110 1798 ntBASIC20.64■□□□□ 0.89
SLC28A2O43868 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC28A2O43868 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SLC28A2O43868 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC28A2O43868 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC28A2O43868 IGHV3-19-201ENST00000521488 291 ntBASIC20.63■□□□□ 0.89
SLC28A2O43868 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC28A2O43868 AC137761.2-201ENST00000561729 223 ntBASIC20.63■□□□□ 0.89
SLC28A2O43868 AC145350.3-201ENST00000569033 163 ntBASIC20.63■□□□□ 0.89
SLC28A2O43868 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC28A2O43868 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC28A2O43868 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC28A2O43868 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC28A2O43868 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC28A2O43868 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC28A2O43868 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC28A2O43868 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC28A2O43868 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC28A2O43868 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SLC28A2O43868 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 AC006015.1-201ENST00000429970 570 ntBASIC20.62■□□□□ 0.89
SLC28A2O43868 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.62■□□□□ 0.89
SLC28A2O43868 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC28A2O43868 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC28A2O43868 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC28A2O43868 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC28A2O43868 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC28A2O43868 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC28A2O43868 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms