Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SGCEO43556 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SGCEO43556 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.98■□□□□ 0.63
SGCEO43556 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.98■□□□□ 0.63
SGCEO43556 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.98■□□□□ 0.63
SGCEO43556 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.98■□□□□ 0.63
SGCEO43556 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.98■□□□□ 0.63
SGCEO43556 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.98■□□□□ 0.63
SGCEO43556 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.98■□□□□ 0.63
SGCEO43556 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SGCEO43556 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.97■□□□□ 0.63
SGCEO43556 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.97■□□□□ 0.63
SGCEO43556 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SGCEO43556 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.97■□□□□ 0.63
SGCEO43556 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 AP005435.1-201ENST00000529293 1178 ntBASIC18.97■□□□□ 0.63
SGCEO43556 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.97■□□□□ 0.63
SGCEO43556 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
SGCEO43556 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SGCEO43556 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SGCEO43556 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SGCEO43556 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.97■□□□□ 0.63
SGCEO43556 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.97■□□□□ 0.63
SGCEO43556 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 C11orf96-202ENST00000528572 1834 ntBASIC18.96■□□□□ 0.63
SGCEO43556 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.96■□□□□ 0.63
SGCEO43556 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.96■□□□□ 0.63
SGCEO43556 BX842568.3-201ENST00000418104 571 ntBASIC18.96■□□□□ 0.63
SGCEO43556 PBX2P1-201ENST00000493219 1291 ntBASIC18.96■□□□□ 0.63
SGCEO43556 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.96■□□□□ 0.63
SGCEO43556 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SGCEO43556 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SGCEO43556 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.96■□□□□ 0.63
SGCEO43556 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SGCEO43556 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.95■□□□□ 0.62
SGCEO43556 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGCEO43556 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGCEO43556 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SGCEO43556 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGCEO43556 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
SGCEO43556 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SGCEO43556 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGCEO43556 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGCEO43556 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SGCEO43556 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SGCEO43556 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
SGCEO43556 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGCEO43556 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SGCEO43556 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SGCEO43556 OXCT2P1-201ENST00000447263 1535 ntBASIC18.94■□□□□ 0.62
SGCEO43556 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SGCEO43556 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SGCEO43556 OR7E47P-201ENST00000546390 1422 ntBASIC18.93■□□□□ 0.62
SGCEO43556 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SGCEO43556 LINC00565-201ENST00000562710 2331 ntBASIC18.93■□□□□ 0.62
SGCEO43556 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.93■□□□□ 0.62
SGCEO43556 AC233992.3-201ENST00000607491 485 ntBASIC18.93■□□□□ 0.62
SGCEO43556 AC106739.1-201ENST00000617035 715 ntBASIC18.93■□□□□ 0.62
SGCEO43556 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SGCEO43556 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.93■□□□□ 0.62
SGCEO43556 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SGCEO43556 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SGCEO43556 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.92■□□□□ 0.62
SGCEO43556 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SGCEO43556 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
SGCEO43556 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SGCEO43556 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.92■□□□□ 0.62
SGCEO43556 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.92■□□□□ 0.62
SGCEO43556 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.92■□□□□ 0.62
SGCEO43556 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SGCEO43556 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms