Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
FOXN1O15353 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
FOXN1O15353 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
FOXN1O15353 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.8■■□□□ 1.72
FOXN1O15353 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
FOXN1O15353 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
FOXN1O15353 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.8■■□□□ 1.72
FOXN1O15353 UNC93B4-201ENST00000505679 747 ntBASIC25.8■■□□□ 1.72
FOXN1O15353 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.8■■□□□ 1.72
FOXN1O15353 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC25.8■■□□□ 1.72
FOXN1O15353 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.8■■□□□ 1.72
FOXN1O15353 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
FOXN1O15353 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
FOXN1O15353 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
FOXN1O15353 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
FOXN1O15353 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
FOXN1O15353 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
FOXN1O15353 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.79■■□□□ 1.72
FOXN1O15353 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.79■■□□□ 1.72
FOXN1O15353 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.79■■□□□ 1.72
FOXN1O15353 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.79■■□□□ 1.72
FOXN1O15353 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.79■■□□□ 1.72
FOXN1O15353 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.79■■□□□ 1.72
FOXN1O15353 MIR4758-201ENST00000577688 71 ntBASIC25.79■■□□□ 1.72
FOXN1O15353 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
FOXN1O15353 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
FOXN1O15353 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
FOXN1O15353 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
FOXN1O15353 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.78■■□□□ 1.72
FOXN1O15353 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.78■■□□□ 1.72
FOXN1O15353 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.78■■□□□ 1.72
FOXN1O15353 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.78■■□□□ 1.72
FOXN1O15353 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
FOXN1O15353 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
FOXN1O15353 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
FOXN1O15353 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
FOXN1O15353 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
FOXN1O15353 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.78■■□□□ 1.72
FOXN1O15353 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.78■■□□□ 1.72
FOXN1O15353 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
FOXN1O15353 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.78■■□□□ 1.72
FOXN1O15353 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
FOXN1O15353 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
FOXN1O15353 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
FOXN1O15353 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
FOXN1O15353 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
FOXN1O15353 ESRRAP1-201ENST00000400596 1257 ntBASIC25.77■■□□□ 1.72
FOXN1O15353 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
FOXN1O15353 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.77■■□□□ 1.72
FOXN1O15353 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.77■■□□□ 1.72
FOXN1O15353 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
FOXN1O15353 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
FOXN1O15353 BX005040.4-201ENST00000637145 1518 ntBASIC25.77■■□□□ 1.72
FOXN1O15353 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.77■■□□□ 1.72
FOXN1O15353 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.76■■□□□ 1.71
FOXN1O15353 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
FOXN1O15353 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
FOXN1O15353 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
FOXN1O15353 AC073912.3-201ENST00000624414 853 ntBASIC25.76■■□□□ 1.71
FOXN1O15353 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.76■■□□□ 1.71
FOXN1O15353 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
FOXN1O15353 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
FOXN1O15353 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
FOXN1O15353 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
FOXN1O15353 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
FOXN1O15353 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
FOXN1O15353 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
FOXN1O15353 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.75■■□□□ 1.71
FOXN1O15353 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
FOXN1O15353 AC133552.2-202ENST00000575694 574 ntBASIC25.75■■□□□ 1.71
FOXN1O15353 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
FOXN1O15353 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
FOXN1O15353 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
FOXN1O15353 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.74■■□□□ 1.71
FOXN1O15353 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 AC211429.1-201ENST00000415277 523 ntBASIC25.74■■□□□ 1.71
FOXN1O15353 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC25.74■■□□□ 1.71
FOXN1O15353 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.74■■□□□ 1.71
FOXN1O15353 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.74■■□□□ 1.71
FOXN1O15353 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.74■■□□□ 1.71
FOXN1O15353 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.74■■□□□ 1.71
FOXN1O15353 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.74■■□□□ 1.71
FOXN1O15353 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.74■■□□□ 1.71
FOXN1O15353 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.74■■□□□ 1.71
FOXN1O15353 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
FOXN1O15353 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.73■■□□□ 1.71
FOXN1O15353 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
FOXN1O15353 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
FOXN1O15353 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.73■■□□□ 1.71
FOXN1O15353 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms