Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.53■■□□□ 1.04
PFDN6O15212 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.53■■□□□ 1.04
PFDN6O15212 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN6O15212 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN6O15212 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN6O15212 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN6O15212 BX842568.3-201ENST00000418104 571 ntBASIC21.53■■□□□ 1.04
PFDN6O15212 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.53■■□□□ 1.04
PFDN6O15212 SLC47A1P1-202ENST00000449666 945 ntBASIC21.53■■□□□ 1.04
PFDN6O15212 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN6O15212 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
PFDN6O15212 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.53■■□□□ 1.04
PFDN6O15212 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN6O15212 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PFDN6O15212 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PFDN6O15212 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PFDN6O15212 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.52■■□□□ 1.04
PFDN6O15212 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PFDN6O15212 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN6O15212 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PFDN6O15212 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.52■■□□□ 1.03
PFDN6O15212 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.51■■□□□ 1.03
PFDN6O15212 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.51■■□□□ 1.03
PFDN6O15212 MIR4767-201ENST00000582827 78 ntBASIC21.51■■□□□ 1.03
PFDN6O15212 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PFDN6O15212 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.51■■□□□ 1.03
PFDN6O15212 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PFDN6O15212 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN6O15212 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.5■■□□□ 1.03
PFDN6O15212 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PFDN6O15212 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.5■■□□□ 1.03
PFDN6O15212 AC024257.2-201ENST00000549699 147 ntBASIC21.5■■□□□ 1.03
PFDN6O15212 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.5■■□□□ 1.03
PFDN6O15212 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PFDN6O15212 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 AL034346.1-201ENST00000568244 1277 ntBASIC21.49■■□□□ 1.03
PFDN6O15212 AC233992.3-201ENST00000607491 485 ntBASIC21.49■■□□□ 1.03
PFDN6O15212 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.49■■□□□ 1.03
PFDN6O15212 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN6O15212 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
PFDN6O15212 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PFDN6O15212 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN6O15212 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.48■■□□□ 1.03
PFDN6O15212 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PFDN6O15212 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN6O15212 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN6O15212 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.48■■□□□ 1.03
PFDN6O15212 LINC00565-201ENST00000562710 2331 ntBASIC21.48■■□□□ 1.03
PFDN6O15212 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.48■■□□□ 1.03
PFDN6O15212 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.48■■□□□ 1.03
PFDN6O15212 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.48■■□□□ 1.03
PFDN6O15212 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.48■■□□□ 1.03
PFDN6O15212 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN6O15212 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN6O15212 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PFDN6O15212 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PFDN6O15212 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PFDN6O15212 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.47■■□□□ 1.03
PFDN6O15212 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.47■■□□□ 1.03
PFDN6O15212 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PFDN6O15212 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PFDN6O15212 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.47■■□□□ 1.03
PFDN6O15212 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.47■■□□□ 1.03
PFDN6O15212 AC096631.2-201ENST00000436136 790 ntBASIC21.47■■□□□ 1.03
PFDN6O15212 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PFDN6O15212 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PFDN6O15212 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PFDN6O15212 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PFDN6O15212 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PFDN6O15212 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.47■■□□□ 1.03
PFDN6O15212 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PFDN6O15212 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms