Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
CASQ2O14958 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASQ2O14958 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASQ2O14958 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASQ2O14958 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASQ2O14958 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CASQ2O14958 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CASQ2O14958 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASQ2O14958 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.43■□□□□ 0.86
CASQ2O14958 FEM1AP1-201ENST00000431297 1995 ntBASIC20.43■□□□□ 0.86
CASQ2O14958 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CASQ2O14958 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.43■□□□□ 0.86
CASQ2O14958 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CASQ2O14958 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CASQ2O14958 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASQ2O14958 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASQ2O14958 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CASQ2O14958 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CASQ2O14958 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CASQ2O14958 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.43■□□□□ 0.86
CASQ2O14958 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.42■□□□□ 0.86
CASQ2O14958 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.42■□□□□ 0.86
CASQ2O14958 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.42■□□□□ 0.86
CASQ2O14958 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
CASQ2O14958 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CASQ2O14958 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CASQ2O14958 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.42■□□□□ 0.86
CASQ2O14958 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CASQ2O14958 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.42■□□□□ 0.86
CASQ2O14958 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.42■□□□□ 0.86
CASQ2O14958 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASQ2O14958 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
CASQ2O14958 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
CASQ2O14958 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
CASQ2O14958 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.41■□□□□ 0.86
CASQ2O14958 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CASQ2O14958 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.41■□□□□ 0.86
CASQ2O14958 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASQ2O14958 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASQ2O14958 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CASQ2O14958 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASQ2O14958 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CASQ2O14958 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASQ2O14958 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASQ2O14958 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASQ2O14958 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.4■□□□□ 0.86
CASQ2O14958 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASQ2O14958 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CASQ2O14958 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASQ2O14958 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASQ2O14958 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
CASQ2O14958 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.39■□□□□ 0.86
CASQ2O14958 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CASQ2O14958 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
CASQ2O14958 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CASQ2O14958 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASQ2O14958 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CASQ2O14958 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CASQ2O14958 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.39■□□□□ 0.85
CASQ2O14958 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASQ2O14958 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASQ2O14958 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CASQ2O14958 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASQ2O14958 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASQ2O14958 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASQ2O14958 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CASQ2O14958 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CASQ2O14958 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASQ2O14958 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.37■□□□□ 0.85
CASQ2O14958 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.37■□□□□ 0.85
CASQ2O14958 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms