Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF11O14788 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFSF11O14788 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF11O14788 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF11O14788 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TNFSF11O14788 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF11O14788 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF11O14788 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF11O14788 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF11O14788 AC012676.1-201ENST00000574705 1949 ntBASIC19.34■□□□□ 0.69
TNFSF11O14788 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF11O14788 AC123595.1-201ENST00000440769 1046 ntBASIC19.34■□□□□ 0.69
TNFSF11O14788 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.34■□□□□ 0.69
TNFSF11O14788 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF11O14788 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF11O14788 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF11O14788 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF11O14788 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TNFSF11O14788 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF11O14788 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TNFSF11O14788 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF11O14788 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TNFSF11O14788 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF11O14788 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF11O14788 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF11O14788 LINC02228-203ENST00000641970 1355 ntBASIC19.33■□□□□ 0.69
TNFSF11O14788 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.33■□□□□ 0.69
TNFSF11O14788 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF11O14788 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF11O14788 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
TNFSF11O14788 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF11O14788 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF11O14788 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.33■□□□□ 0.68
TNFSF11O14788 TPRG1LP1-201ENST00000598702 760 ntBASIC19.33■□□□□ 0.68
TNFSF11O14788 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF11O14788 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF11O14788 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TNFSF11O14788 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFSF11O14788 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF11O14788 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF11O14788 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF11O14788 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TNFSF11O14788 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TNFSF11O14788 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.32■□□□□ 0.68
TNFSF11O14788 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 AC242852.2-201ENST00000615738 1807 ntBASIC19.32■□□□□ 0.68
TNFSF11O14788 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF11O14788 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF11O14788 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.32■□□□□ 0.68
TNFSF11O14788 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TNFSF11O14788 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TNFSF11O14788 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF11O14788 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF11O14788 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TNFSF11O14788 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF11O14788 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TNFSF11O14788 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.31■□□□□ 0.68
TNFSF11O14788 AL034346.1-201ENST00000568244 1277 ntBASIC19.31■□□□□ 0.68
TNFSF11O14788 CCDC92B-201ENST00000575506 885 ntBASIC19.31■□□□□ 0.68
TNFSF11O14788 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF11O14788 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 AC009237.3-201ENST00000393279 1427 ntBASIC19.31■□□□□ 0.68
TNFSF11O14788 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TNFSF11O14788 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF11O14788 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF11O14788 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFSF11O14788 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF11O14788 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFSF11O14788 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF11O14788 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF11O14788 MIR5787-201ENST00000611784 55 ntBASIC19.3■□□□□ 0.68
TNFSF11O14788 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.3■□□□□ 0.68
TNFSF11O14788 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFSF11O14788 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF11O14788 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms