Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.3■□□□□ 0.84
CLIC1O00299 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC1O00299 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.29■□□□□ 0.84
CLIC1O00299 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC1O00299 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC1O00299 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC1O00299 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.29■□□□□ 0.84
CLIC1O00299 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC1O00299 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.29■□□□□ 0.84
CLIC1O00299 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.29■□□□□ 0.84
CLIC1O00299 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLIC1O00299 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLIC1O00299 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.29■□□□□ 0.84
CLIC1O00299 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC1O00299 OR7E47P-201ENST00000546390 1422 ntBASIC20.28■□□□□ 0.84
CLIC1O00299 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC1O00299 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLIC1O00299 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC1O00299 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.28■□□□□ 0.84
CLIC1O00299 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC1O00299 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC1O00299 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.28■□□□□ 0.84
CLIC1O00299 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC1O00299 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.28■□□□□ 0.84
CLIC1O00299 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC1O00299 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLIC1O00299 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.28■□□□□ 0.84
CLIC1O00299 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC1O00299 AC026471.6-201ENST00000622954 1905 ntBASIC20.27■□□□□ 0.84
CLIC1O00299 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLIC1O00299 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC1O00299 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.27■□□□□ 0.84
CLIC1O00299 AL356740.2-201ENST00000601559 647 ntBASIC20.27■□□□□ 0.84
CLIC1O00299 AC068587.7-201ENST00000641602 218 ntBASIC20.27■□□□□ 0.84
CLIC1O00299 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.27■□□□□ 0.84
CLIC1O00299 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLIC1O00299 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLIC1O00299 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.27■□□□□ 0.83
CLIC1O00299 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLIC1O00299 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.27■□□□□ 0.83
CLIC1O00299 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.27■□□□□ 0.83
CLIC1O00299 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.27■□□□□ 0.83
CLIC1O00299 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLIC1O00299 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.26■□□□□ 0.83
CLIC1O00299 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC1O00299 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.25■□□□□ 0.83
CLIC1O00299 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLIC1O00299 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLIC1O00299 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.25■□□□□ 0.83
CLIC1O00299 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.25■□□□□ 0.83
CLIC1O00299 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.25■□□□□ 0.83
CLIC1O00299 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.25■□□□□ 0.83
CLIC1O00299 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC1O00299 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.25■□□□□ 0.83
CLIC1O00299 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CLIC1O00299 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.24■□□□□ 0.83
CLIC1O00299 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC1O00299 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CLIC1O00299 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC1O00299 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CLIC1O00299 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC1O00299 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC1O00299 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC1O00299 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC1O00299 MIR3181-201ENST00000578512 73 ntBASIC20.24■□□□□ 0.83
CLIC1O00299 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC1O00299 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.24■□□□□ 0.83
CLIC1O00299 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC1O00299 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC1O00299 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC1O00299 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC1O00299 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CLIC1O00299 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CLIC1O00299 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC1O00299 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC1O00299 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC1O00299 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLIC1O00299 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.23■□□□□ 0.83
CLIC1O00299 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC1O00299 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.23■□□□□ 0.83
CLIC1O00299 MIR3621-201ENST00000580529 85 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms