Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TAF4O00268 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.97■□□□□ 0.95
TAF4O00268 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.97■□□□□ 0.95
TAF4O00268 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.97■□□□□ 0.95
TAF4O00268 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 POU5F1P3-201ENST00000428824 1078 ntBASIC20.97■□□□□ 0.95
TAF4O00268 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.97■□□□□ 0.95
TAF4O00268 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.97■□□□□ 0.95
TAF4O00268 AL024507.2-201ENST00000606070 2574 ntBASIC20.97■□□□□ 0.95
TAF4O00268 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TAF4O00268 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TAF4O00268 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TAF4O00268 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TAF4O00268 PRORSD1P-201ENST00000295112 541 ntBASIC20.96■□□□□ 0.95
TAF4O00268 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TAF4O00268 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TAF4O00268 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TAF4O00268 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.96■□□□□ 0.95
TAF4O00268 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.96■□□□□ 0.95
TAF4O00268 MFSD11-216ENST00000590393 1141 ntBASIC20.96■□□□□ 0.95
TAF4O00268 LINC00565-201ENST00000562710 2331 ntBASIC20.96■□□□□ 0.95
TAF4O00268 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.96■□□□□ 0.95
TAF4O00268 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TAF4O00268 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.96■□□□□ 0.95
TAF4O00268 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TAF4O00268 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TAF4O00268 C9orf163-202ENST00000624034 2573 ntBASIC20.95■□□□□ 0.95
TAF4O00268 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TAF4O00268 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TAF4O00268 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TAF4O00268 RPS2P52-201ENST00000469610 820 ntBASIC20.95■□□□□ 0.94
TAF4O00268 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.95■□□□□ 0.94
TAF4O00268 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.95■□□□□ 0.94
TAF4O00268 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.95■□□□□ 0.94
TAF4O00268 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
TAF4O00268 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TAF4O00268 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TAF4O00268 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TAF4O00268 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TAF4O00268 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.95■□□□□ 0.94
TAF4O00268 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TAF4O00268 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TAF4O00268 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TAF4O00268 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.94■□□□□ 0.94
TAF4O00268 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TAF4O00268 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TAF4O00268 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TAF4O00268 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TAF4O00268 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TAF4O00268 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.94■□□□□ 0.94
TAF4O00268 KRT18P29-201ENST00000397031 1267 ntBASIC20.94■□□□□ 0.94
TAF4O00268 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TAF4O00268 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.94■□□□□ 0.94
TAF4O00268 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TAF4O00268 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.94■□□□□ 0.94
TAF4O00268 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.94■□□□□ 0.94
TAF4O00268 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.94■□□□□ 0.94
TAF4O00268 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TAF4O00268 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TAF4O00268 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TAF4O00268 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TAF4O00268 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TAF4O00268 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TAF4O00268 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
TAF4O00268 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.93■□□□□ 0.94
TAF4O00268 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.93■□□□□ 0.94
TAF4O00268 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TAF4O00268 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TAF4O00268 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TAF4O00268 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TAF4O00268 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
TAF4O00268 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TAF4O00268 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.92■□□□□ 0.94
TAF4O00268 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TAF4O00268 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TAF4O00268 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.92■□□□□ 0.94
TAF4O00268 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TAF4O00268 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.92■□□□□ 0.94
TAF4O00268 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TAF4O00268 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TAF4O00268 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TAF4O00268 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
TAF4O00268 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TAF4O00268 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TAF4O00268 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms