Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 AC135279.3-201ENST00000610945 1311 ntBASIC17.63■□□□□ 0.41
AP4M1O00189 LINC01529-204ENST00000636474 1715 ntBASIC17.63■□□□□ 0.41
AP4M1O00189 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4M1O00189 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP4M1O00189 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4M1O00189 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
AP4M1O00189 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.62■□□□□ 0.41
AP4M1O00189 PBX2P1-201ENST00000493219 1291 ntBASIC17.62■□□□□ 0.41
AP4M1O00189 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4M1O00189 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4M1O00189 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.62■□□□□ 0.41
AP4M1O00189 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
AP4M1O00189 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP4M1O00189 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4M1O00189 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4M1O00189 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4M1O00189 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
AP4M1O00189 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4M1O00189 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4M1O00189 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
AP4M1O00189 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4M1O00189 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4M1O00189 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4M1O00189 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4M1O00189 DUX4L4-201ENST00000566884 1269 ntBASIC17.61■□□□□ 0.41
AP4M1O00189 AC011298.3-201ENST00000615796 283 ntBASIC17.61■□□□□ 0.41
AP4M1O00189 AC106739.1-201ENST00000617035 715 ntBASIC17.61■□□□□ 0.41
AP4M1O00189 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4M1O00189 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4M1O00189 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4M1O00189 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
AP4M1O00189 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
AP4M1O00189 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4M1O00189 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4M1O00189 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
AP4M1O00189 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.6■□□□□ 0.41
AP4M1O00189 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.6■□□□□ 0.41
AP4M1O00189 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.6■□□□□ 0.41
AP4M1O00189 SERBP1P1-201ENST00000396021 1160 ntBASIC17.6■□□□□ 0.41
AP4M1O00189 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.6■□□□□ 0.41
AP4M1O00189 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
AP4M1O00189 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
AP4M1O00189 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4M1O00189 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4M1O00189 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
AP4M1O00189 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 AC006455.2-201ENST00000429931 906 ntBASIC17.59■□□□□ 0.41
AP4M1O00189 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4M1O00189 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4M1O00189 AC133561.4-201ENST00000566112 224 ntBASIC17.59■□□□□ 0.41
AP4M1O00189 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
AP4M1O00189 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4M1O00189 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
AP4M1O00189 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4M1O00189 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
AP4M1O00189 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
AP4M1O00189 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4M1O00189 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4M1O00189 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4M1O00189 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.58■□□□□ 0.4
AP4M1O00189 AC024257.2-201ENST00000549699 147 ntBASIC17.58■□□□□ 0.4
AP4M1O00189 MIR3181-201ENST00000578512 73 ntBASIC17.58■□□□□ 0.4
AP4M1O00189 pRNA.6-201ENST00000610482 90 ntBASIC17.58■□□□□ 0.4
AP4M1O00189 pRNA.5-201ENST00000612139 90 ntBASIC17.58■□□□□ 0.4
AP4M1O00189 pRNA.11-201ENST00000618423 90 ntBASIC17.58■□□□□ 0.4
AP4M1O00189 pRNA.13-201ENST00000619112 90 ntBASIC17.58■□□□□ 0.4
AP4M1O00189 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.58■□□□□ 0.4
AP4M1O00189 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4M1O00189 AC079630.1-202ENST00000618127 1840 ntBASIC17.58■□□□□ 0.4
AP4M1O00189 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4M1O00189 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4M1O00189 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
AP4M1O00189 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4M1O00189 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4M1O00189 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms