Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 AC026310.3-201ENST00000625186 2373 ntBASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHKB-CPT1BH3BT56 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 SHD-204ENST00000599689 1729 ntTSL 5 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHKB-CPT1BH3BT56 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 TERT-206ENST00000508104 2486 ntTSL 5 BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 AC135983.2-203ENST00000454486 1613 ntBASIC12.04□□□□□ -0.48
CHKB-CPT1BH3BT56 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 AC087289.5-201ENST00000586076 3175 ntBASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC12.03□□□□□ -0.48
CHKB-CPT1BH3BT56 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms