Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 FXN-202ENST00000396364 980 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC144AA2RUR9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 MIR663A-201ENST00000385250 93 ntBASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 AC010141.2-201ENST00000452426 721 ntBASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC144AA2RUR9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 AP001160.3-201ENST00000601484 763 ntBASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC144AA2RUR9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC144AA2RUR9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC144AA2RUR9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC31.14■■■□□ 2.58
CCDC144AA2RUR9 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.14■■■□□ 2.58
CCDC144AA2RUR9 MYCNOS-205ENST00000641950 531 ntBASIC31.14■■■□□ 2.58
CCDC144AA2RUR9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CCDC144AA2RUR9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CCDC144AA2RUR9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CCDC144AA2RUR9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 AC138907.5-202ENST00000569484 235 ntBASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC144AA2RUR9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC144AA2RUR9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 AC006970.2-201ENST00000450065 779 ntBASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC144AA2RUR9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC144AA2RUR9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC31.1■■■□□ 2.57
CCDC144AA2RUR9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
CCDC144AA2RUR9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms