Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 AC007952.6-201ENST00000573168 2673 ntBASIC18.79■□□□□ 0.6
SHISA3A0PJX4 AC003957.1-201ENST00000625108 2673 ntBASIC18.79■□□□□ 0.6
SHISA3A0PJX4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHISA3A0PJX4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SHISA3A0PJX4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 AC005703.6-201ENST00000623265 1329 ntBASIC18.77■□□□□ 0.6
SHISA3A0PJX4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 BHLHE23-202ENST00000612929 1109 ntBASIC18.77■□□□□ 0.6
SHISA3A0PJX4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA3A0PJX4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHISA3A0PJX4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHISA3A0PJX4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHISA3A0PJX4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SHISA3A0PJX4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHISA3A0PJX4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHISA3A0PJX4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHISA3A0PJX4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 AC010980.1-201ENST00000587192 1142 ntBASIC18.76■□□□□ 0.59
SHISA3A0PJX4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.76■□□□□ 0.59
SHISA3A0PJX4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA3A0PJX4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms