Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 AC099791.2-201ENST00000605725 427 ntBASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 OR7E47P-201ENST00000546390 1422 ntBASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.69■■□□□ 1.06
TCRBV9S1A1TA0A576 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 KRT16P3-201ENST00000439127 1283 ntBASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV9S1A1TA0A576 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV9S1A1TA0A576 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.67■■□□□ 1.06
TCRBV9S1A1TA0A576 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TCRBV9S1A1TA0A576 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.67■■□□□ 1.06
TCRBV9S1A1TA0A576 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.67■■□□□ 1.06
TCRBV9S1A1TA0A576 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.67■■□□□ 1.06
TCRBV9S1A1TA0A576 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.67■■□□□ 1.06
TCRBV9S1A1TA0A576 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV9S1A1TA0A576 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 MIR3181-201ENST00000578512 73 ntBASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.65■■□□□ 1.06
TCRBV9S1A1TA0A576 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TCRBV9S1A1TA0A576 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TCRBV9S1A1TA0A576 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TCRBV9S1A1TA0A576 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TCRBV9S1A1TA0A576 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.64■■□□□ 1.05
TCRBV9S1A1TA0A576 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TCRBV9S1A1TA0A576 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TCRBV9S1A1TA0A576 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.64■■□□□ 1.05
TCRBV9S1A1TA0A576 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.64■■□□□ 1.05
TCRBV9S1A1TA0A576 PKD1P6-201ENST00000343738 4769 ntBASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 OR2I1P-207ENST00000453522 948 ntBASIC21.63■■□□□ 1.05
TCRBV9S1A1TA0A576 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms