Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 AC136469.2-201ENST00000623944 1028 ntBASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 CA15P2-201ENST00000611168 834 ntBASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRGV4A0A0C4DH28 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 UNC93B3-201ENST00000308076 687 ntBASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 AC139530.1-201ENST00000575312 1977 ntBASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 AC137767.1-201ENST00000602918 1920 ntBASIC15.41■□□□□ 0.06
TRGV4A0A0C4DH28 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 AL031602.1-201ENST00000633169 911 ntBASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV4A0A0C4DH28 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 AC010525.1-201ENST00000585559 441 ntBASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 AL136162.1-201ENST00000607711 1078 ntBASIC15.39■□□□□ 0.05
TRGV4A0A0C4DH28 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms