Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV10A0A0B4J240 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV10A0A0B4J240 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV10A0A0B4J240 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV10A0A0B4J240 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV10A0A0B4J240 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV10A0A0B4J240 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV10A0A0B4J240 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV10A0A0B4J240 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV10A0A0B4J240 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 AL034346.1-201ENST00000568244 1277 ntBASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 KRT87P-202ENST00000534226 1464 ntBASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV10A0A0B4J240 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 OR7E47P-201ENST00000546390 1422 ntBASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 AC080038.1-201ENST00000611274 1154 ntBASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 BID-214ENST00000617586 542 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV10A0A0B4J240 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 KRT18P61-201ENST00000585825 1298 ntBASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV10A0A0B4J240 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 ESRRAP2-201ENST00000418437 1549 ntBASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV10A0A0B4J240 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 AP004607.7-201ENST00000527152 1677 ntBASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV10A0A0B4J240 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms