Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 SMUG1P1-201ENST00000590640 811 ntBASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.58■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF12-TNFSF13A0A0A6YY99 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AC105233.4-201ENST00000642045 216 ntBASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 EP400NL-214ENST00000641289 2402 ntBASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AL358852.1-201ENST00000623174 1268 ntBASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.56■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AC079834.2-201ENST00000609776 1949 ntBASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 YBX1P1-201ENST00000445822 960 ntBASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AL034346.1-201ENST00000568244 1277 ntBASIC19.54■□□□□ 0.72
TNFSF12-TNFSF13A0A0A6YY99 AC092666.2-201ENST00000613287 246 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms