Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 DUOXA1-208ENST00000558996 2684 ntTSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 AL031577.1-201ENST00000339867 399 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 AC073834.1-201ENST00000357045 590 ntTSL 4 BASIC12.64□□□□□ -0.39
SLC1A1P43005 AREG-201ENST00000395748 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 AC012100.1-201ENST00000470304 282 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 AC099343.1-201ENST00000513481 609 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC12.64□□□□□ -0.39
SLC1A1P43005 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SLC1A1P43005 PKMP4-201ENST00000523134 306 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC12.64□□□□□ -0.39
SLC1A1P43005 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 TMEM205-204ENST00000586218 593 ntTSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 CYP4F10P-201ENST00000589560 752 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC12.64□□□□□ -0.39
SLC1A1P43005 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 EMP3-204ENST00000596315 761 ntTSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 AC136475.9-201ENST00000605240 497 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 LINC01686-201ENST00000566297 1376 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 AL157902.2-201ENST00000623435 1492 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 SDAD1P1-201ENST00000519902 3174 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 EIF4B-203ENST00000420463 1936 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 GPR61-207ENST00000618721 2823 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 RAPGEF3-219ENST00000549151 3265 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 GALK2-216ENST00000560031 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC12.63□□□□□ -0.39
SLC1A1P43005 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 LINC00877-203ENST00000468646 2506 ntTSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SLC1A1P43005 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 TMEM253-201ENST00000418511 1526 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SLC1A1P43005 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 LINC00880-201ENST00000471357 2018 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 LARP4-206ENST00000518444 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SLC1A1P43005 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC12.63□□□□□ -0.39
SLC1A1P43005 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 AGPAT5P1-201ENST00000455855 1019 ntBASIC12.63□□□□□ -0.39
SLC1A1P43005 CAPNS2-201ENST00000457326 1016 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SLC1A1P43005 AC009078.2-201ENST00000489723 1254 ntTSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC12.63□□□□□ -0.39
SLC1A1P43005 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC12.63□□□□□ -0.39
SLC1A1P43005 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
SLC1A1P43005 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 BIN3-210ENST00000522268 321 ntTSL 5 BASIC12.63□□□□□ -0.39
SLC1A1P43005 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC12.63□□□□□ -0.39
SLC1A1P43005 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC12.63□□□□□ -0.39
SLC1A1P43005 LINC02395-202ENST00000547443 724 ntTSL 3 BASIC12.63□□□□□ -0.39
SLC1A1P43005 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 AL022344.2-201ENST00000568976 968 ntBASIC12.63□□□□□ -0.39
SLC1A1P43005 ZNF213-AS1-202ENST00000571449 919 ntTSL 3 BASIC12.63□□□□□ -0.39
SLC1A1P43005 AC018697.1-201ENST00000577354 472 ntTSL 4 BASIC12.63□□□□□ -0.39
SLC1A1P43005 SIGLEC21P-201ENST00000598990 1010 ntBASIC12.63□□□□□ -0.39
SLC1A1P43005 AC106782.5-201ENST00000616011 337 ntBASIC12.63□□□□□ -0.39
SLC1A1P43005 AC137936.2-201ENST00000636329 620 ntBASIC12.63□□□□□ -0.39
SLC1A1P43005 CDK20-204ENST00000375883 2301 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 NBEAP3-201ENST00000420638 1493 ntBASIC12.63□□□□□ -0.39
SLC1A1P43005 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 GTF2A2-202ENST00000396060 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 AC093330.2-201ENST00000624814 3998 ntBASIC12.63□□□□□ -0.39
SLC1A1P43005 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC12.63□□□□□ -0.39
SLC1A1P43005 AC022730.4-201ENST00000520259 2367 ntTSL 2 BASIC12.63□□□□□ -0.39
SLC1A1P43005 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SLC1A1P43005 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 ZC3HC1-209ENST00000481503 1741 ntTSL 5 BASIC12.62□□□□□ -0.39
SLC1A1P43005 PDK3-202ENST00000441463 1921 ntTSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 AC005070.3-201ENST00000607968 2646 ntBASIC12.62□□□□□ -0.39
SLC1A1P43005 SUSD4-207ENST00000484758 2736 ntTSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 SDCCAG8-201ENST00000366541 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SLC1A1P43005 AL358075.4-201ENST00000540385 1553 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms