Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.563e-6■■■■■ 38.8
SF3B1O75533 AMH-203ENST00000592877 534 ntTSL 324.02■■□□□ 1.443e-6■■■■■ 38.8
SF3B1O75533 AMH-202ENST00000589313 1686 ntTSL 523.63■■□□□ 1.373e-6■■■■■ 38.8
SF3B1O75533 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.21■■□□□ 1.313e-6■■■■■ 38.8
SF3B1O75533 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.053e-6■■■■■ 38.8
SF3B1O75533 ZNF276-203ENST00000561536 1947 ntTSL 219.74■□□□□ 0.753e-6■■■■■ 38.8
SF3B1O75533 NECAP2-209ENST00000504858 727 ntTSL 518.31■□□□□ 0.523e-6■■■■■ 38.8
SF3B1O75533 CECR7-201ENST00000414401 546 ntTSL 418■□□□□ 0.473e-6■■■■■ 38.8
SF3B1O75533 DMTF1-214ENST00000434534 581 ntTSL 417.96■□□□□ 0.463e-6■■■■■ 38.8
SF3B1O75533 DMTF1-226ENST00000579592 579 ntTSL 417.48■□□□□ 0.393e-6■■■■■ 38.8
SF3B1O75533 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.43■□□□□ 0.383e-6■■■■■ 38.8
SF3B1O75533 ALYREF-204ENST00000512673 441 ntTSL 217.37■□□□□ 0.372e-10■■■■■ 38.8
SF3B1O75533 DMTF1-237ENST00000584457 569 ntTSL 417.15■□□□□ 0.343e-6■■■■■ 38.8
SF3B1O75533 SSR2-207ENST00000473699 1027 ntTSL 316.9■□□□□ 0.33e-6■■■■■ 38.8
SF3B1O75533 CCNB1-204ENST00000506572 1331 ntTSL 1 (best)16.68■□□□□ 0.263e-6■■■■■ 38.8
SF3B1O75533 SSR2-217ENST00000531917 555 ntTSL 516.28■□□□□ 0.23e-6■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-212ENST00000556400 604 ntTSL 215.62■□□□□ 0.093e-6■■■■■ 38.8
SF3B1O75533 SSR2-211ENST00000484320 1148 ntTSL 515.59■□□□□ 0.093e-6■■■■■ 38.8
SF3B1O75533 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.54■□□□□ 0.083e-6■■■■■ 38.8
SF3B1O75533 NECAP2-210ENST00000508680 470 ntTSL 315.41■□□□□ 0.063e-6■■■■■ 38.8
SF3B1O75533 SEC11A-205ENST00000558217 882 ntTSL 214.45□□□□□ -0.13e-6■■■■■ 38.8
SF3B1O75533 CDC45-212ENST00000493724 469 ntTSL 214.37□□□□□ -0.112e-10■■■■■ 38.8
SF3B1O75533 SSR2-209ENST00000480176 1040 ntTSL 214.23□□□□□ -0.133e-6■■■■■ 38.8
SF3B1O75533 CEPT1-205ENST00000476865 783 ntTSL 514.06□□□□□ -0.163e-6■■■■■ 38.8
SF3B1O75533 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.182e-10■■■■■ 38.8
SF3B1O75533 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.243e-6■■■■■ 38.8
SF3B1O75533 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.283e-6■■■■■ 38.8
SF3B1O75533 LDAH-204ENST00000403006 1895 ntTSL 5 BASIC13.01□□□□□ -0.331e-6■■■■■ 38.8
SF3B1O75533 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC12.95□□□□□ -0.341e-6■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC12.92□□□□□ -0.343e-6■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-201ENST00000551597 507 ntTSL 1 (best)12.5□□□□□ -0.413e-6■■■■■ 38.8
SF3B1O75533 DMTF1-238ENST00000584619 1645 ntTSL 512.41□□□□□ -0.423e-6■■■■■ 38.8
SF3B1O75533 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC12.18□□□□□ -0.463e-6■■■■■ 38.8
SF3B1O75533 LDAH-202ENST00000381090 2045 ntTSL 5 BASIC12.17□□□□□ -0.461e-6■■■■■ 38.8
SF3B1O75533 CECR7-203ENST00000609596 2283 ntTSL 511.9□□□□□ -0.53e-6■■■■■ 38.8
SF3B1O75533 ACADVL-234ENST00000583760 599 ntTSL 211.69□□□□□ -0.543e-6■■■■■ 38.8
SF3B1O75533 SSR2-206ENST00000472898 711 ntTSL 211.3□□□□□ -0.63e-6■■■■■ 38.8
SF3B1O75533 SSR2-218ENST00000532074 1008 ntTSL 511.3□□□□□ -0.63e-6■■■■■ 38.8
SF3B1O75533 FAM133B-211ENST00000494079 854 ntTSL 311.23□□□□□ -0.613e-6■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-209ENST00000555707 1983 ntTSL 1 (best)11.16□□□□□ -0.623e-6■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-205ENST00000554378 741 ntTSL 1 (best)11.09□□□□□ -0.633e-6■■■■■ 38.8
SF3B1O75533 RSBN1L-203ENST00000445288 2667 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.652e-10■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC10.44□□□□□ -0.743e-6■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC10.13□□□□□ -0.793e-6■■■■■ 38.8
SF3B1O75533 SSR2-213ENST00000496742 825 ntTSL 3 BASIC10.02□□□□□ -0.813e-6■■■■■ 38.8
SF3B1O75533 PMM2-209ENST00000565896 514 ntTSL 410□□□□□ -0.813e-6■■■■■ 38.8
SF3B1O75533 CEPT1-207ENST00000480324 2110 ntTSL 29.94□□□□□ -0.823e-6■■■■■ 38.8
SF3B1O75533 SSR2-203ENST00000466905 666 ntTSL 59.83□□□□□ -0.843e-6■■■■■ 38.8
SF3B1O75533 PFKFB3-218ENST00000639949 587 ntTSL 49.79□□□□□ -0.843e-6■■■■■ 38.8
SF3B1O75533 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.873e-6■■■■■ 38.8
SF3B1O75533 SSR2-208ENST00000474377 639 ntTSL 59.55□□□□□ -0.883e-6■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC9.48□□□□□ -0.893e-6■■■■■ 38.8
SF3B1O75533 DMTF1-205ENST00000414630 627 ntTSL 59.22□□□□□ -0.933e-6■■■■■ 38.8
SF3B1O75533 SSR2-212ENST00000488179 1712 ntTSL 59.15□□□□□ -0.943e-6■■■■■ 38.8
SF3B1O75533 SSR2-215ENST00000529008 849 ntTSL 5 BASIC8.97□□□□□ -0.973e-6■■■■■ 38.8
SF3B1O75533 SSR2-202ENST00000368311 5166 ntTSL 1 (best)8.91□□□□□ -0.983e-6■■■■■ 38.8
SF3B1O75533 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.991e-6■■■■■ 38.8
SF3B1O75533 C14orf37-203ENST00000554218 572 ntTSL 48.6□□□□□ -1.033e-6■■■■■ 38.8
SF3B1O75533 SEC11A-204ENST00000558196 540 ntTSL 38.6□□□□□ -1.033e-6■■■■■ 38.8
SF3B1O75533 DNTTIP2-201ENST00000359208 2199 ntTSL 28.17□□□□□ -1.13e-6■■■■■ 38.8
SF3B1O75533 PMM2-215ENST00000568602 550 ntTSL 58.17□□□□□ -1.13e-6■■■■■ 38.8
SF3B1O75533 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.16□□□□□ -1.11e-6■■■■■ 38.8
SF3B1O75533 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.05□□□□□ -1.121e-6■■■■■ 38.8
SF3B1O75533 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.88□□□□□ -1.153e-6■■■■■ 38.8
SF3B1O75533 SSR2-216ENST00000531790 476 ntTSL 57.6□□□□□ -1.193e-6■■■■■ 38.8
SF3B1O75533 DMTF1-217ENST00000448598 572 ntTSL 47.56□□□□□ -1.23e-6■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.55□□□□□ -1.23e-6■■■■■ 38.8
SF3B1O75533 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.45□□□□□ -1.223e-6■■■■■ 38.8
SF3B1O75533 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.41□□□□□ -1.223e-6■■■■■ 38.8
SF3B1O75533 SEC11A-210ENST00000560409 819 ntTSL 37.31□□□□□ -1.243e-6■■■■■ 38.8
SF3B1O75533 DMTF1-216ENST00000447863 3954 ntTSL 1 (best)7.04□□□□□ -1.283e-6■■■■■ 38.8
SF3B1O75533 DMTF1-219ENST00000453049 585 ntTSL 46.98□□□□□ -1.293e-6■■■■■ 38.8
SF3B1O75533 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.8□□□□□ -1.321e-6■■■■■ 38.8
SF3B1O75533 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.16□□□□□ -1.423e-6■■■■■ 38.8
SF3B1O75533 DMTF1-227ENST00000579677 3915 ntTSL 1 (best)6.05□□□□□ -1.443e-6■■■■■ 38.8
SF3B1O75533 STAT2-212ENST00000557417 1063 ntTSL 26.04□□□□□ -1.442e-10■■■■■ 38.8
SF3B1O75533 SPAG5-202ENST00000378976 755 ntTSL 55.96□□□□□ -1.461e-8■■■■■ 38.8
SF3B1O75533 PSMA3-AS1-202ENST00000553657 398 ntTSL 35.81□□□□□ -1.483e-6■■■■■ 38.8
SF3B1O75533 DMTF1-206ENST00000420131 568 ntTSL 45.79□□□□□ -1.483e-6■■■■■ 38.8
SF3B1O75533 DMTF1-210ENST00000428819 533 ntTSL 45.79□□□□□ -1.483e-6■■■■■ 38.8
SF3B1O75533 DMTF1-218ENST00000449088 783 ntTSL 55.79□□□□□ -1.483e-6■■■■■ 38.8
SF3B1O75533 DMTF1-207ENST00000423590 545 ntTSL 55.74□□□□□ -1.493e-6■■■■■ 38.8
SF3B1O75533 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.71□□□□□ -1.491e-6■■■■■ 38.8
SF3B1O75533 DMTF1-211ENST00000430405 637 ntTSL 55.64□□□□□ -1.513e-6■■■■■ 38.8
SF3B1O75533 PMM2-206ENST00000564069 567 ntTSL 45.5□□□□□ -1.533e-6■■■■■ 38.8
SF3B1O75533 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.533e-6■■■■■ 38.8
SF3B1O75533 DMTF1-212ENST00000432366 557 ntTSL 55.27□□□□□ -1.573e-6■■■■■ 38.8
SF3B1O75533 DMTF1-228ENST00000579850 3483 ntTSL 55.07□□□□□ -1.63e-6■■■■■ 38.8
SF3B1O75533 DMTF1-208ENST00000425406 3868 ntTSL 24.95□□□□□ -1.623e-6■■■■■ 38.8
SF3B1O75533 DMTF1-224ENST00000547146 3657 ntTSL 54.74□□□□□ -1.653e-6■■■■■ 38.8
SF3B1O75533 DMTF1-215ENST00000446796 610 ntTSL 53.19□□□□□ -1.93e-6■■■■■ 38.8
SF3B1O75533 MED13-202ENST00000578132 751 ntTSL 32.69□□□□□ -1.983e-6■■■■■ 38.8
SF3B1O75533 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.62□□□□□ -1.993e-6■■■■■ 38.8
SF3B1O75533 DMXL1-208ENST00000509902 577 ntTSL 32.57□□□□□ -23e-6■■■■■ 38.8
SF3B1O75533 FAM133B-209ENST00000490747 717 ntTSL 31.61□□□□□ -2.153e-6■■■■■ 38.8
SF3B1O75533 FAM133B-206ENST00000468931 189 ntTSL 50.86□□□□□ -2.273e-6■■■■■ 38.8
SF3B1O75533 ZEB2-221ENST00000479735 543 ntTSL 421.83■■□□□ 1.093e-6■■■■■ 38.8
SF3B1O75533 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.152e-7■■■■■ 38.8
SF3B1O75533 ELP2-215ENST00000540799 381 ntTSL 311.4□□□□□ -0.587e-7■■■■■ 38.7
SF3B1O75533 DNM2-214ENST00000590787 4299 ntTSL 211.87□□□□□ -0.512e-6■■■■■ 38.7
Retrieved 100 of 46,956 protein–RNA pairs in 3843 ms