RNA–Protein interactions for RNA: ENST00000578132.1

MED13-202, Transcript of mediator complex subunit 13, humanhuman

TSL 3

Gene MED13, Length 751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED13-202ENST00000578132 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
MED13-202ENST00000578132 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
MED13-202ENST00000578132 SENP3Q9H4L4 574 aaPredicted RBP15.2■□□□□ 0.02
MED13-202ENST00000578132 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
MED13-202ENST00000578132 FOXD1Q16676 465 aa14.07□□□□□ -0.16
MED13-202ENST00000578132 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
MED13-202ENST00000578132 MSH5O43196 834 aa13.4□□□□□ -0.26
MED13-202ENST00000578132 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
MED13-202ENST00000578132 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
MED13-202ENST00000578132 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
MED13-202ENST00000578132 ADRA2BP18089 450 aa12.91□□□□□ -0.34
MED13-202ENST00000578132 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
MED13-202ENST00000578132 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
MED13-202ENST00000578132 MAPK8IP2Q13387 824 aaPredicted RBP11.89□□□□□ -0.51
MED13-202ENST00000578132 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
MED13-202ENST00000578132 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
MED13-202ENST00000578132 PPP4R3CPQ6ZMV5 832 aa11.5□□□□□ -0.57
MED13-202ENST00000578132 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
MED13-202ENST00000578132 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
MED13-202ENST00000578132 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
MED13-202ENST00000578132 RNF39Q9H2S5 420 aa11.33□□□□□ -0.6
MED13-202ENST00000578132 C1QBPQ07021 282 aaKnown RBP11.23□□□□□ -0.61
MED13-202ENST00000578132 DNAJC5BQ9UF47 199 aa11.2□□□□□ -0.62
MED13-202ENST00000578132 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
MED13-202ENST00000578132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.96□□□□□ -0.652e-7■■□□□ 12
MED13-202ENST00000578132 NPM3O75607 178 aaKnown RBP10.8□□□□□ -0.68
MED13-202ENST00000578132 U3KPZ7 1027 aaPredicted RBP10.6□□□□□ -0.71
MED13-202ENST00000578132 CAPN15O75808 1086 aa10.58□□□□□ -0.72
MED13-202ENST00000578132 DSG3P32926 999 aa10.52□□□□□ -0.73
MED13-202ENST00000578132 APLP2Q06481 763 aa10.52□□□□□ -0.73
MED13-202ENST00000578132 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
MED13-202ENST00000578132 POTEHQ6S545 545 aa10.45□□□□□ -0.74
MED13-202ENST00000578132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.43□□□□□ -0.74
MED13-202ENST00000578132 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
MED13-202ENST00000578132 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
MED13-202ENST00000578132 KCNA4P22459 653 aa10.38□□□□□ -0.75
MED13-202ENST00000578132 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
MED13-202ENST00000578132 TRHP20396 242 aaPredicted RBP10.33□□□□□ -0.76
MED13-202ENST00000578132 SAMD1Q6SPF0 538 aaPredicted RBP10.32□□□□□ -0.76
MED13-202ENST00000578132 ABCB7O75027 752 aa10.24□□□□□ -0.77
MED13-202ENST00000578132 RBM42Q9BTD8 480 aaKnown RBP10.18□□□□□ -0.78
MED13-202ENST00000578132 MYCNP04198 464 aaPredicted RBP10.08□□□□□ -0.8
MED13-202ENST00000578132 POLA2Q14181 598 aa10.01□□□□□ -0.81
MED13-202ENST00000578132 CHRDL2Q6WN34 429 aa9.95□□□□□ -0.82
MED13-202ENST00000578132 ZBTB12Q9Y330 459 aaPredicted RBP9.93□□□□□ -0.82
MED13-202ENST00000578132 AKT1S1Q96B36 256 aa9.85□□□□□ -0.83
MED13-202ENST00000578132 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
MED13-202ENST00000578132 SLC4A1APQ9BWU0 796 aaKnown RBP9.83□□□□□ -0.84
MED13-202ENST00000578132 ATF5Q9Y2D1 282 aaPredicted RBP9.71□□□□□ -0.86
MED13-202ENST00000578132 REM2Q8IYK8 340 aaPredicted RBP9.7□□□□□ -0.86
MED13-202ENST00000578132 SP7Q8TDD2 431 aaPredicted RBP9.68□□□□□ -0.86
MED13-202ENST00000578132 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
MED13-202ENST00000578132 ATXN8OSP0DMR3 200 aa9.63□□□□□ -0.87
MED13-202ENST00000578132 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
MED13-202ENST00000578132 HAX1O00165 279 aa9.57□□□□□ -0.88
MED13-202ENST00000578132 PITPNM1O00562 1244 aa9.57□□□□□ -0.88
MED13-202ENST00000578132 FBLN2P98095 1184 aa9.56□□□□□ -0.88
MED13-202ENST00000578132 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.881e-6■■■□□ 15
MED13-202ENST00000578132 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
MED13-202ENST00000578132 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
MED13-202ENST00000578132 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
MED13-202ENST00000578132 ZBTB22O15209 634 aa9.48□□□□□ -0.89
MED13-202ENST00000578132 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
MED13-202ENST00000578132 EVX2Q03828 476 aa9.4□□□□□ -0.9
MED13-202ENST00000578132 ZNF692Q9BU19 519 aaPredicted RBP9.37□□□□□ -0.91
MED13-202ENST00000578132 CLEC11AQ9Y240 323 aa9.37□□□□□ -0.91
MED13-202ENST00000578132 PRKAR2AP13861 404 aaKnown RBP9.35□□□□□ -0.91
MED13-202ENST00000578132 SSUH2Q9Y2M2 353 aa9.31□□□□□ -0.92
MED13-202ENST00000578132 MKRN4PQ13434 485 aaPredicted RBP9.27□□□□□ -0.93
MED13-202ENST00000578132 C19orf67A6NJJ6 358 aa9.25□□□□□ -0.93
MED13-202ENST00000578132 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
MED13-202ENST00000578132 PABPN1Q86U42 306 aaKnown RBP eCLIP9.18□□□□□ -0.94
MED13-202ENST00000578132 GABBR2O75899 941 aa9.16□□□□□ -0.94
MED13-202ENST00000578132 CLCN6P51797 869 aa9.15□□□□□ -0.94
MED13-202ENST00000578132 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
MED13-202ENST00000578132 LHX8Q68G74 356 aa9.09□□□□□ -0.95
MED13-202ENST00000578132 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
MED13-202ENST00000578132 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
MED13-202ENST00000578132 STAG3Q9UJ98 1225 aa9.01□□□□□ -0.97
MED13-202ENST00000578132 POTEIP0CG38 1075 aa8.97□□□□□ -0.97
MED13-202ENST00000578132 DCBLD2Q96PD2 775 aa8.96□□□□□ -0.98
MED13-202ENST00000578132 ZNF579Q8NAF0 562 aaKnown RBP8.91□□□□□ -0.98
MED13-202ENST00000578132 CSRNP3Q8WYN3 585 aa8.9□□□□□ -0.98
MED13-202ENST00000578132 PAK3O75914 559 aaPredicted RBP8.89□□□□□ -0.99
MED13-202ENST00000578132 ZRANB1Q9UGI0 708 aa8.89□□□□□ -0.99
MED13-202ENST00000578132 CREBZFQ9NS37 354 aa8.85□□□□□ -0.99
MED13-202ENST00000578132 SPDYE4A6NLX3 237 aa8.84□□□□□ -0.99
MED13-202ENST00000578132 NPM1P06748 294 aaKnown RBP eCLIP8.83□□□□□ -1
MED13-202ENST00000578132 GALR2O43603 387 aaPredicted RBP8.75□□□□□ -1.01
MED13-202ENST00000578132 EHMT2Q96KQ7 1210 aa8.72□□□□□ -1.01
MED13-202ENST00000578132 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
MED13-202ENST00000578132 POTEB2H3BUK9 544 aa8.67□□□□□ -1.02
MED13-202ENST00000578132 OTUD5Q96G74 571 aa8.67□□□□□ -1.02
MED13-202ENST00000578132 PLSCR2Q9NRY7 297 aa8.67□□□□□ -1.02
MED13-202ENST00000578132 MNX1P50219 401 aaPredicted RBP8.65□□□□□ -1.02
MED13-202ENST00000578132 PLEKHG5O94827 1062 aa8.63□□□□□ -1.03
MED13-202ENST00000578132 C7P10643 843 aa8.63□□□□□ -1.03
MED13-202ENST00000578132 SLC39A7Q92504 469 aa8.63□□□□□ -1.03
MED13-202ENST00000578132 ASTLQ6HA08 431 aaPredicted RBP8.62□□□□□ -1.03
MED13-202ENST00000578132 MAMSTRQ6ZN01 415 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms