RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
NF1-214ENST00000490416 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
NF1-214ENST00000490416 SENP3Q9H4L4 574 aaPredicted RBP24.2■■□□□ 1.46
NF1-214ENST00000490416 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
NF1-214ENST00000490416 FOXD1Q16676 465 aa22.45■■□□□ 1.18
NF1-214ENST00000490416 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
NF1-214ENST00000490416 ADRA2BP18089 450 aa21.29■■□□□ 1
NF1-214ENST00000490416 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
NF1-214ENST00000490416 PIAS4Q8N2W9 510 aaPredicted RBP21.13■□□□□ 0.97
NF1-214ENST00000490416 MSH5O43196 834 aa20.9■□□□□ 0.94
NF1-214ENST00000490416 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
NF1-214ENST00000490416 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
NF1-214ENST00000490416 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
NF1-214ENST00000490416 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
NF1-214ENST00000490416 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
NF1-214ENST00000490416 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
NF1-214ENST00000490416 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
NF1-214ENST00000490416 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
NF1-214ENST00000490416 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
NF1-214ENST00000490416 KCNA4P22459 653 aa18.56■□□□□ 0.56
NF1-214ENST00000490416 NPM3O75607 178 aaKnown RBP18.53■□□□□ 0.56
NF1-214ENST00000490416 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
NF1-214ENST00000490416 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
NF1-214ENST00000490416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
NF1-214ENST00000490416 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
NF1-214ENST00000490416 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
NF1-214ENST00000490416 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
NF1-214ENST00000490416 C1QBPQ07021 282 aaKnown RBP17.64■□□□□ 0.41
NF1-214ENST00000490416 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
NF1-214ENST00000490416 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
NF1-214ENST00000490416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
NF1-214ENST00000490416 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
NF1-214ENST00000490416 FOXD4L1Q9NU39 408 aa17.22■□□□□ 0.35
NF1-214ENST00000490416 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
NF1-214ENST00000490416 APLP2Q06481 763 aa17.16■□□□□ 0.34
NF1-214ENST00000490416 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
NF1-214ENST00000490416 CAPN15O75808 1086 aa17.11■□□□□ 0.33
NF1-214ENST00000490416 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
NF1-214ENST00000490416 ZBTB22O15209 634 aa17.02■□□□□ 0.32
NF1-214ENST00000490416 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
NF1-214ENST00000490416 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
NF1-214ENST00000490416 DSG3P32926 999 aa16.85■□□□□ 0.29
NF1-214ENST00000490416 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
NF1-214ENST00000490416 ABCB7O75027 752 aa16.71■□□□□ 0.27
NF1-214ENST00000490416 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
NF1-214ENST00000490416 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
NF1-214ENST00000490416 ATXN8OSP0DMR3 200 aa16.66■□□□□ 0.26
NF1-214ENST00000490416 POLA2Q14181 598 aa16.55■□□□□ 0.24
NF1-214ENST00000490416 ZBTB12Q9Y330 459 aaPredicted RBP16.31■□□□□ 0.2
NF1-214ENST00000490416 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
NF1-214ENST00000490416 FBLN2P98095 1184 aa16.11■□□□□ 0.17
NF1-214ENST00000490416 OSCARQ8IYS5 282 aa16■□□□□ 0.15
NF1-214ENST00000490416 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
NF1-214ENST00000490416 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
NF1-214ENST00000490416 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
NF1-214ENST00000490416 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
NF1-214ENST00000490416 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
NF1-214ENST00000490416 ZNF692Q9BU19 519 aaPredicted RBP15.7■□□□□ 0.1
NF1-214ENST00000490416 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
NF1-214ENST00000490416 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
NF1-214ENST00000490416 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
NF1-214ENST00000490416 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
NF1-214ENST00000490416 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
NF1-214ENST00000490416 POTEHQ6S545 545 aa15.47■□□□□ 0.07
NF1-214ENST00000490416 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
NF1-214ENST00000490416 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
NF1-214ENST00000490416 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
NF1-214ENST00000490416 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
NF1-214ENST00000490416 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.03
NF1-214ENST00000490416 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
NF1-214ENST00000490416 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
NF1-214ENST00000490416 FKBP8Q14318 412 aa15.16■□□□□ 0.02
NF1-214ENST00000490416 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
NF1-214ENST00000490416 PROM2Q8N271 834 aa15.1■□□□□ 0.01
NF1-214ENST00000490416 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
NF1-214ENST00000490416 HAX1O00165 279 aa14.92□□□□□ -0.02
NF1-214ENST00000490416 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
NF1-214ENST00000490416 FARP1Q9Y4F1 1045 aaPredicted RBP14.85□□□□□ -0.03
NF1-214ENST00000490416 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
NF1-214ENST00000490416 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
NF1-214ENST00000490416 C19orf67A6NJJ6 358 aa14.74□□□□□ -0.05
NF1-214ENST00000490416 MIER1Q8N108 512 aa14.73□□□□□ -0.05
NF1-214ENST00000490416 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
NF1-214ENST00000490416 NPM1P06748 294 aaKnown RBP eCLIP14.7□□□□□ -0.06
NF1-214ENST00000490416 PLCD3Q8N3E9 789 aa14.68□□□□□ -0.06
NF1-214ENST00000490416 EVX2Q03828 476 aa14.67□□□□□ -0.06
NF1-214ENST00000490416 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
NF1-214ENST00000490416 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
NF1-214ENST00000490416 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
NF1-214ENST00000490416 ZBTB47Q9UFB7 747 aaPredicted RBP14.56□□□□□ -0.08
NF1-214ENST00000490416 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
NF1-214ENST00000490416 VASPP50552 380 aaPredicted RBP14.51□□□□□ -0.09
NF1-214ENST00000490416 ZNF579Q8NAF0 562 aaKnown RBP14.44□□□□□ -0.1
NF1-214ENST00000490416 GABBR2O75899 941 aa14.42□□□□□ -0.1
NF1-214ENST00000490416 CLCN6P51797 869 aa14.41□□□□□ -0.1
NF1-214ENST00000490416 TSPYL2Q9H2G4 693 aaPredicted RBP14.41□□□□□ -0.1
NF1-214ENST00000490416 KLHL34Q8N239 644 aa14.41□□□□□ -0.1
NF1-214ENST00000490416 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
NF1-214ENST00000490416 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
NF1-214ENST00000490416 NUBP1P53384 320 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms