Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 AC008267.3-201ENST00000448776 712 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 AC122683.1-201ENST00000456335 717 ntTSL 3 BASIC12.75□□□□□ -0.37
SLC1A1P43005 ATP6V0CP1-201ENST00000482495 618 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 PPATP1-201ENST00000496669 1547 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 MEF2C-213ENST00000508569 1882 ntTSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC12.75□□□□□ -0.37
SLC1A1P43005 AL606834.1-201ENST00000553836 1169 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SLC1A1P43005 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC12.75□□□□□ -0.37
SLC1A1P43005 AC009812.1-201ENST00000605948 1059 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 TUBD1-216ENST00000613721 2184 ntTSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 AC139100.2-201ENST00000616901 662 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 DDX6P2-201ENST00000619520 1455 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 AC099804.1-201ENST00000623105 714 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 AC021683.4-201ENST00000623348 1099 ntBASIC12.75□□□□□ -0.37
SLC1A1P43005 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 PIP4K2C-203ENST00000540759 2876 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 TP53-204ENST00000420246 2653 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 TP53-227ENST00000622645 2653 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 MICU1-212ENST00000642044 2221 ntBASIC12.74□□□□□ -0.37
SLC1A1P43005 ZSCAN30-202ENST00000420878 4323 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 TRIM23-203ENST00000381018 1855 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC12.74□□□□□ -0.37
SLC1A1P43005 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC12.74□□□□□ -0.37
SLC1A1P43005 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC12.74□□□□□ -0.37
SLC1A1P43005 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 LINC02372-201ENST00000507482 1486 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SLC1A1P43005 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 CDCA4P3-201ENST00000442572 689 ntBASIC12.74□□□□□ -0.37
SLC1A1P43005 AL592463.1-201ENST00000451108 635 ntTSL 3 BASIC12.74□□□□□ -0.37
SLC1A1P43005 AC073465.1-201ENST00000456671 464 ntBASIC12.74□□□□□ -0.37
SLC1A1P43005 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 BCRP5-201ENST00000514371 253 ntBASIC12.74□□□□□ -0.37
SLC1A1P43005 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.74□□□□□ -0.37
SLC1A1P43005 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 SRP14-208ENST00000560773 468 ntTSL 3 BASIC12.74□□□□□ -0.37
SLC1A1P43005 AL109954.3-201ENST00000615088 558 ntBASIC12.74□□□□□ -0.37
SLC1A1P43005 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC12.74□□□□□ -0.37
SLC1A1P43005 AC113208.3-201ENST00000637356 2523 ntBASIC12.74□□□□□ -0.37
SLC1A1P43005 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SLC1A1P43005 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 CTCFL-209ENST00000433949 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 PAX4-208ENST00000639438 2206 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SLC1A1P43005 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 SPATA33-201ENST00000301031 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 CAPN9-203ENST00000366666 2173 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 PRICKLE1-215ENST00000640055 3778 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SLC1A1P43005 GBAP1-201ENST00000368374 1873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 AC105219.4-201ENST00000529743 1809 ntTSL 3 BASIC12.74□□□□□ -0.37
SLC1A1P43005 PIH1D2-207ENST00000530641 1838 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC1A1P43005 NOP2-203ENST00000399466 2701 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 GYS1-202ENST00000323798 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 SPATA13-213ENST00000439928 1721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC1A1P43005 AC012313.5-201ENST00000594816 2517 ntBASIC12.73□□□□□ -0.37
SLC1A1P43005 PCID2-204ENST00000375459 1668 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 LAS1L-203ENST00000374811 2439 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC12.73□□□□□ -0.37
SLC1A1P43005 PCCB-214ENST00000478469 4502 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 CHRM1-201ENST00000306960 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 SUV39H1-201ENST00000337852 2978 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms