Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 NOC2LP1-202ENST00000452600 2235 ntBASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 TNXA-203ENST00000507684 2038 ntBASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01558Q9Y6Z2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01558Q9Y6Z2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.27□□□□□ -0.6
LINC01558Q9Y6Z2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01558Q9Y6Z2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01558Q9Y6Z2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01558Q9Y6Z2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms