Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 AC006058.3-201ENST00000606217 1069 ntBASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PTCH2Q9Y6C5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PTCH2Q9Y6C5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PTCH2Q9Y6C5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.64■■□□□ 1.54
PTCH2Q9Y6C5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.64■■□□□ 1.54
PTCH2Q9Y6C5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
PTCH2Q9Y6C5 AC022211.4-201ENST00000625094 2161 ntBASIC24.64■■□□□ 1.53
PTCH2Q9Y6C5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.64■■□□□ 1.53
PTCH2Q9Y6C5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.64■■□□□ 1.53
PTCH2Q9Y6C5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
PTCH2Q9Y6C5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
PTCH2Q9Y6C5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
PTCH2Q9Y6C5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
PTCH2Q9Y6C5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 AC093787.1-201ENST00000450396 207 ntBASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 AC128676.1-201ENST00000454392 318 ntBASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
PTCH2Q9Y6C5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 AC010141.2-201ENST00000452426 721 ntBASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCH2Q9Y6C5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 TERF1P5-201ENST00000477545 1207 ntBASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 KRT18P20-201ENST00000548986 1279 ntBASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PTCH2Q9Y6C5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 UNC93B4-201ENST00000505679 747 ntBASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PTCH2Q9Y6C5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 AC016405.3-201ENST00000607710 860 ntBASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 OR10C1-204ENST00000622521 1039 ntBASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 MYC-209ENST00000641252 345 ntBASIC24.59■■□□□ 1.53
PTCH2Q9Y6C5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 BX276092.2-201ENST00000417668 665 ntBASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 AC138907.5-202ENST00000569484 235 ntBASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 AC020928.2-201ENST00000588717 2197 ntBASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms