Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 AP001160.3-201ENST00000601484 763 ntBASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CDC42BPBQ9Y5S2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 KRT18P20-201ENST00000548986 1279 ntBASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 MARS-234ENST00000630571 216 ntTSL 5 BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 MARS-235ENST00000630803 183 ntTSL 3 BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPBQ9Y5S2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC33.14■■■□□ 2.89
CDC42BPBQ9Y5S2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
CDC42BPBQ9Y5S2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CDC42BPBQ9Y5S2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
CDC42BPBQ9Y5S2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC33.13■■■□□ 2.89
CDC42BPBQ9Y5S2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
CDC42BPBQ9Y5S2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC33.13■■■□□ 2.89
CDC42BPBQ9Y5S2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC33.13■■■□□ 2.89
CDC42BPBQ9Y5S2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CDC42BPBQ9Y5S2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDC42BPBQ9Y5S2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC33.12■■■□□ 2.89
CDC42BPBQ9Y5S2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDC42BPBQ9Y5S2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC33.12■■■□□ 2.89
CDC42BPBQ9Y5S2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CDC42BPBQ9Y5S2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDC42BPBQ9Y5S2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
CDC42BPBQ9Y5S2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPBQ9Y5S2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
CDC42BPBQ9Y5S2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPBQ9Y5S2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
CDC42BPBQ9Y5S2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPBQ9Y5S2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPBQ9Y5S2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC33.1■■■□□ 2.89
CDC42BPBQ9Y5S2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC33.1■■■□□ 2.89
CDC42BPBQ9Y5S2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
CDC42BPBQ9Y5S2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC33.1■■■□□ 2.89
CDC42BPBQ9Y5S2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CDC42BPBQ9Y5S2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC33.1■■■□□ 2.89
CDC42BPBQ9Y5S2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 LINC01960-201ENST00000563759 1884 ntBASIC33.09■■■□□ 2.89
CDC42BPBQ9Y5S2 AC013268.1-206ENST00000638368 961 ntBASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 AC112229.1-201ENST00000639295 961 ntBASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPBQ9Y5S2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
CDC42BPBQ9Y5S2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
CDC42BPBQ9Y5S2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC33.07■■■□□ 2.88
CDC42BPBQ9Y5S2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CDC42BPBQ9Y5S2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 AC092068.2-201ENST00000590491 1708 ntBASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CDC42BPBQ9Y5S2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 AC007322.4-201ENST00000509611 723 ntBASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 EEF1DP3-203ENST00000566025 782 ntBASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC33.05■■■□□ 2.88
CDC42BPBQ9Y5S2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC33.04■■■□□ 2.88
CDC42BPBQ9Y5S2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CDC42BPBQ9Y5S2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CDC42BPBQ9Y5S2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CDC42BPBQ9Y5S2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC33.04■■■□□ 2.88
CDC42BPBQ9Y5S2 AC068338.2-201ENST00000563278 1430 ntBASIC33.03■■■□□ 2.88
CDC42BPBQ9Y5S2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CDC42BPBQ9Y5S2 AC093827.2-201ENST00000512654 315 ntBASIC33.03■■■□□ 2.88
CDC42BPBQ9Y5S2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC33.03■■■□□ 2.88
CDC42BPBQ9Y5S2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC33.03■■■□□ 2.88
CDC42BPBQ9Y5S2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC33.03■■■□□ 2.88
CDC42BPBQ9Y5S2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
CDC42BPBQ9Y5S2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 AC105036.2-201ENST00000569468 176 ntBASIC33.02■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms