Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCL1Q9Y2P8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.61■□□□□ 0.41
RCL1Q9Y2P8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 MIR4449-201ENST00000578365 66 ntBASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 AC129492.7-201ENST00000622992 756 ntBASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RCL1Q9Y2P8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 CA15P2-201ENST00000611168 834 ntBASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.59■□□□□ 0.41
RCL1Q9Y2P8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RCL1Q9Y2P8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RCL1Q9Y2P8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
RCL1Q9Y2P8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RCL1Q9Y2P8 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 THA1P-201ENST00000590384 1145 ntBASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 AC009086.3-201ENST00000623486 1008 ntBASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.58■□□□□ 0.4
RCL1Q9Y2P8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RCL1Q9Y2P8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms