Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 AL353803.4-201ENST00000565882 1934 ntBASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 MIR3960-201ENST00000583311 91 ntBASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH1Q9Y2L9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 AC012354.3-201ENST00000623734 483 ntBASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.46■□□□□ 0.87
LRCH1Q9Y2L9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 RP9P-202ENST00000450133 1212 ntBASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRCH1Q9Y2L9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRCH1Q9Y2L9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRCH1Q9Y2L9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRCH1Q9Y2L9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LRCH1Q9Y2L9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRCH1Q9Y2L9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRCH1Q9Y2L9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRCH1Q9Y2L9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms