Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHMP2BQ9UQN3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 AC005229.4-201ENST00000610085 2198 ntBASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 AC241377.3-202ENST00000626088 1088 ntBASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 AC241585.3-202ENST00000628937 1088 ntBASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 AC245100.8-202ENST00000629247 1058 ntBASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 AC133637.1-201ENST00000624115 1537 ntBASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CHMP2BQ9UQN3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 KRT16P3-201ENST00000439127 1283 ntBASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 pRNA.6-201ENST00000610482 90 ntBASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 pRNA.5-201ENST00000612139 90 ntBASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 pRNA.11-201ENST00000618423 90 ntBASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 pRNA.13-201ENST00000619112 90 ntBASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 AL031602.1-201ENST00000633169 911 ntBASIC21.93■■□□□ 1.1
CHMP2BQ9UQN3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP2BQ9UQN3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHMP2BQ9UQN3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP2BQ9UQN3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP2BQ9UQN3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMP2BQ9UQN3 AC099791.2-201ENST00000605725 427 ntBASIC21.89■■□□□ 1.09
CHMP2BQ9UQN3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CHMP2BQ9UQN3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP2BQ9UQN3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP2BQ9UQN3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.89■■□□□ 1.09
CHMP2BQ9UQN3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms